Protein–RNA interactions for Protein: Q8WWK9

CKAP2, Cytoskeleton-associated protein 2, humanhuman

Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2Q8WWK9 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CKAP2Q8WWK9 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CKAP2Q8WWK9 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC16.61■□□□□ 0.25
CKAP2Q8WWK9 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC16.61■□□□□ 0.25
CKAP2Q8WWK9 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
CKAP2Q8WWK9 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CKAP2Q8WWK9 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CKAP2Q8WWK9 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC16.61■□□□□ 0.25
CKAP2Q8WWK9 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
CKAP2Q8WWK9 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CKAP2Q8WWK9 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
CKAP2Q8WWK9 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC16.61■□□□□ 0.25
CKAP2Q8WWK9 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CKAP2Q8WWK9 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CKAP2Q8WWK9 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC16.61■□□□□ 0.25
CKAP2Q8WWK9 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CKAP2Q8WWK9 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
CKAP2Q8WWK9 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC16.61■□□□□ 0.25
CKAP2Q8WWK9 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC16.61■□□□□ 0.25
CKAP2Q8WWK9 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
CKAP2Q8WWK9 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CKAP2Q8WWK9 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
CKAP2Q8WWK9 AL845331.1-201ENST00000424978 1190 ntBASIC16.61■□□□□ 0.25
CKAP2Q8WWK9 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC16.61■□□□□ 0.25
CKAP2Q8WWK9 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC16.61■□□□□ 0.25
CKAP2Q8WWK9 SNX5-210ENST00000481323 562 ntTSL 3 BASIC16.61■□□□□ 0.25
CKAP2Q8WWK9 COX11P1-201ENST00000489116 835 ntBASIC16.61■□□□□ 0.25
CKAP2Q8WWK9 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC16.61■□□□□ 0.25
CKAP2Q8WWK9 GUSBP12-201ENST00000513727 720 ntBASIC16.61■□□□□ 0.25
CKAP2Q8WWK9 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC16.61■□□□□ 0.25
CKAP2Q8WWK9 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC16.61■□□□□ 0.25
CKAP2Q8WWK9 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
CKAP2Q8WWK9 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CKAP2Q8WWK9 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CKAP2Q8WWK9 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CKAP2Q8WWK9 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CKAP2Q8WWK9 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
CKAP2Q8WWK9 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CKAP2Q8WWK9 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC16.61■□□□□ 0.25
CKAP2Q8WWK9 LINC01568-207ENST00000641790 1380 ntBASIC16.61■□□□□ 0.25
CKAP2Q8WWK9 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
CKAP2Q8WWK9 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CKAP2Q8WWK9 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CKAP2Q8WWK9 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC16.61■□□□□ 0.25
CKAP2Q8WWK9 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
CKAP2Q8WWK9 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
CKAP2Q8WWK9 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC16.61■□□□□ 0.25
CKAP2Q8WWK9 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CKAP2Q8WWK9 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
CKAP2Q8WWK9 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CKAP2Q8WWK9 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC16.6■□□□□ 0.25
CKAP2Q8WWK9 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
CKAP2Q8WWK9 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
CKAP2Q8WWK9 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC16.6■□□□□ 0.25
CKAP2Q8WWK9 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CKAP2Q8WWK9 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CKAP2Q8WWK9 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CKAP2Q8WWK9 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CKAP2Q8WWK9 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CKAP2Q8WWK9 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CKAP2Q8WWK9 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC16.6■□□□□ 0.25
CKAP2Q8WWK9 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CKAP2Q8WWK9 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CKAP2Q8WWK9 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CKAP2Q8WWK9 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CKAP2Q8WWK9 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CKAP2Q8WWK9 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC16.6■□□□□ 0.25
CKAP2Q8WWK9 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CKAP2Q8WWK9 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CKAP2Q8WWK9 POU5F1P6-201ENST00000466990 990 ntBASIC16.6■□□□□ 0.25
CKAP2Q8WWK9 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC16.6■□□□□ 0.25
CKAP2Q8WWK9 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CKAP2Q8WWK9 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC16.6■□□□□ 0.25
CKAP2Q8WWK9 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CKAP2Q8WWK9 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC16.6■□□□□ 0.25
CKAP2Q8WWK9 WDR6-223ENST00000627177 207 ntTSL 2 BASIC16.6■□□□□ 0.25
CKAP2Q8WWK9 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC16.6■□□□□ 0.25
CKAP2Q8WWK9 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CKAP2Q8WWK9 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
CKAP2Q8WWK9 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
CKAP2Q8WWK9 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC16.6■□□□□ 0.25
CKAP2Q8WWK9 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC16.6■□□□□ 0.25
CKAP2Q8WWK9 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CKAP2Q8WWK9 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CKAP2Q8WWK9 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC16.6■□□□□ 0.25
CKAP2Q8WWK9 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CKAP2Q8WWK9 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC16.6■□□□□ 0.25
CKAP2Q8WWK9 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC16.6■□□□□ 0.25
CKAP2Q8WWK9 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CKAP2Q8WWK9 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC16.6■□□□□ 0.25
CKAP2Q8WWK9 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
CKAP2Q8WWK9 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
CKAP2Q8WWK9 C1R-202ENST00000536053 2347 ntTSL 2 BASIC16.59■□□□□ 0.25
CKAP2Q8WWK9 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
CKAP2Q8WWK9 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
CKAP2Q8WWK9 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
CKAP2Q8WWK9 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
CKAP2Q8WWK9 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC16.59■□□□□ 0.25
CKAP2Q8WWK9 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC16.59■□□□□ 0.25
CKAP2Q8WWK9 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms