Protein–RNA interactions for Protein: Q8NFW1

COL22A1, Collagen alpha-1(XXII) chain, humanhuman

Predicted RBP Predictions only

Length 1,626 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL22A1Q8NFW1 Metazoa_SRP.166-201ENST00000612530 253 ntBASIC21.8■■□□□ 1.08
COL22A1Q8NFW1 AL139011.1-202ENST00000642063 584 ntBASIC21.8■■□□□ 1.08
COL22A1Q8NFW1 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
COL22A1Q8NFW1 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
COL22A1Q8NFW1 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
COL22A1Q8NFW1 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC21.8■■□□□ 1.08
COL22A1Q8NFW1 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC21.8■■□□□ 1.08
COL22A1Q8NFW1 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
COL22A1Q8NFW1 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
COL22A1Q8NFW1 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC21.8■■□□□ 1.08
COL22A1Q8NFW1 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC21.8■■□□□ 1.08
COL22A1Q8NFW1 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
COL22A1Q8NFW1 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC21.8■■□□□ 1.08
COL22A1Q8NFW1 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
COL22A1Q8NFW1 PKIG-203ENST00000372887 769 ntTSL 3 BASIC21.8■■□□□ 1.08
COL22A1Q8NFW1 AC074194.1-201ENST00000505025 622 ntTSL 4 BASIC21.8■■□□□ 1.08
COL22A1Q8NFW1 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
COL22A1Q8NFW1 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC21.8■■□□□ 1.08
COL22A1Q8NFW1 LINC00854-216ENST00000636331 718 ntAPPRIS P5 TSL 5 BASIC21.8■■□□□ 1.08
COL22A1Q8NFW1 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
COL22A1Q8NFW1 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC21.8■■□□□ 1.08
COL22A1Q8NFW1 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
COL22A1Q8NFW1 ABALON-201ENST00000629058 1903 ntBASIC21.8■■□□□ 1.08
COL22A1Q8NFW1 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC21.79■■□□□ 1.08
COL22A1Q8NFW1 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC21.79■■□□□ 1.08
COL22A1Q8NFW1 MSTO2P-201ENST00000314835 1709 ntBASIC21.79■■□□□ 1.08
COL22A1Q8NFW1 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
COL22A1Q8NFW1 MRFAP1-202ENST00000382581 1584 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
COL22A1Q8NFW1 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
COL22A1Q8NFW1 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
COL22A1Q8NFW1 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC21.79■■□□□ 1.08
COL22A1Q8NFW1 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
COL22A1Q8NFW1 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
COL22A1Q8NFW1 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
COL22A1Q8NFW1 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC21.79■■□□□ 1.08
COL22A1Q8NFW1 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
COL22A1Q8NFW1 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC21.79■■□□□ 1.08
COL22A1Q8NFW1 COX6A2-201ENST00000287490 440 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
COL22A1Q8NFW1 RANBP1-201ENST00000331821 837 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
COL22A1Q8NFW1 MIR326-201ENST00000362220 95 ntBASIC21.79■■□□□ 1.08
COL22A1Q8NFW1 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
COL22A1Q8NFW1 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC21.79■■□□□ 1.08
COL22A1Q8NFW1 AC025810.1-201ENST00000569986 981 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
COL22A1Q8NFW1 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
COL22A1Q8NFW1 AC008687.7-202ENST00000637404 953 ntBASIC21.79■■□□□ 1.08
COL22A1Q8NFW1 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
COL22A1Q8NFW1 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC21.79■■□□□ 1.08
COL22A1Q8NFW1 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
COL22A1Q8NFW1 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC21.79■■□□□ 1.08
COL22A1Q8NFW1 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC21.78■■□□□ 1.08
COL22A1Q8NFW1 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
COL22A1Q8NFW1 AZGP1P1-201ENST00000411909 902 ntBASIC21.78■■□□□ 1.08
COL22A1Q8NFW1 AC016694.1-201ENST00000434179 700 ntBASIC21.78■■□□□ 1.08
COL22A1Q8NFW1 UEVLD-212ENST00000541984 755 ntTSL 3 BASIC21.78■■□□□ 1.08
COL22A1Q8NFW1 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC21.78■■□□□ 1.08
COL22A1Q8NFW1 AL031600.1-201ENST00000563610 570 ntTSL 4 BASIC21.78■■□□□ 1.08
COL22A1Q8NFW1 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC21.78■■□□□ 1.08
COL22A1Q8NFW1 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
COL22A1Q8NFW1 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
COL22A1Q8NFW1 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC21.78■■□□□ 1.08
COL22A1Q8NFW1 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
COL22A1Q8NFW1 AC098818.2-201ENST00000564925 2320 ntBASIC21.78■■□□□ 1.08
COL22A1Q8NFW1 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
COL22A1Q8NFW1 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC21.78■■□□□ 1.08
COL22A1Q8NFW1 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC21.78■■□□□ 1.08
COL22A1Q8NFW1 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC21.77■■□□□ 1.08
COL22A1Q8NFW1 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
COL22A1Q8NFW1 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
COL22A1Q8NFW1 CRABP1-201ENST00000299529 772 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
COL22A1Q8NFW1 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
COL22A1Q8NFW1 AL138767.1-201ENST00000354527 744 ntTSL 3 BASIC21.77■■□□□ 1.08
COL22A1Q8NFW1 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC21.77■■□□□ 1.08
COL22A1Q8NFW1 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
COL22A1Q8NFW1 AC104758.2-201ENST00000562716 483 ntTSL 3 BASIC21.77■■□□□ 1.08
COL22A1Q8NFW1 AC016629.1-201ENST00000596579 586 ntBASIC21.77■■□□□ 1.08
COL22A1Q8NFW1 KLK3-211ENST00000597483 810 ntTSL 2 BASIC21.77■■□□□ 1.08
COL22A1Q8NFW1 SPIB-207ENST00000597855 564 ntTSL 4 BASIC21.77■■□□□ 1.08
COL22A1Q8NFW1 AL008638.5-201ENST00000623814 1298 ntBASIC21.77■■□□□ 1.08
COL22A1Q8NFW1 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
COL22A1Q8NFW1 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC21.77■■□□□ 1.08
COL22A1Q8NFW1 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC21.77■■□□□ 1.08
COL22A1Q8NFW1 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
COL22A1Q8NFW1 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC21.77■■□□□ 1.08
COL22A1Q8NFW1 KRT8P37-201ENST00000451609 1420 ntBASIC21.77■■□□□ 1.08
COL22A1Q8NFW1 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
COL22A1Q8NFW1 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC21.77■■□□□ 1.08
COL22A1Q8NFW1 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
COL22A1Q8NFW1 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
COL22A1Q8NFW1 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
COL22A1Q8NFW1 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC21.77■■□□□ 1.08
COL22A1Q8NFW1 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
COL22A1Q8NFW1 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.07
COL22A1Q8NFW1 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC21.77■■□□□ 1.07
COL22A1Q8NFW1 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
COL22A1Q8NFW1 BAATP1-201ENST00000412284 1225 ntBASIC21.77■■□□□ 1.07
COL22A1Q8NFW1 CNN2P8-201ENST00000421872 913 ntBASIC21.77■■□□□ 1.07
COL22A1Q8NFW1 DGUOK-AS1-202ENST00000439192 563 ntTSL 2 BASIC21.77■■□□□ 1.07
COL22A1Q8NFW1 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC21.77■■□□□ 1.07
COL22A1Q8NFW1 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC21.77■■□□□ 1.07
COL22A1Q8NFW1 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC21.77■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms