Protein–RNA interactions for Protein: Q8NET4

RTL9, Retrotransposon Gag-like protein 9, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL9Q8NET4 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
RTL9Q8NET4 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
RTL9Q8NET4 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
RTL9Q8NET4 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC20.4■□□□□ 0.86
RTL9Q8NET4 GPAA1P2-202ENST00000606848 1787 ntBASIC20.4■□□□□ 0.86
RTL9Q8NET4 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
RTL9Q8NET4 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
RTL9Q8NET4 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
RTL9Q8NET4 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
RTL9Q8NET4 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
RTL9Q8NET4 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
RTL9Q8NET4 AL512638.1-201ENST00000457493 794 ntBASIC20.4■□□□□ 0.86
RTL9Q8NET4 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC20.4■□□□□ 0.86
RTL9Q8NET4 AC027369.6-201ENST00000525520 931 ntBASIC20.4■□□□□ 0.86
RTL9Q8NET4 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC20.4■□□□□ 0.86
RTL9Q8NET4 COQ9-214ENST00000567933 882 ntTSL 3 BASIC20.4■□□□□ 0.86
RTL9Q8NET4 SPDYE22P-201ENST00000582158 798 ntBASIC20.4■□□□□ 0.86
RTL9Q8NET4 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC20.4■□□□□ 0.86
RTL9Q8NET4 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC20.4■□□□□ 0.86
RTL9Q8NET4 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC20.4■□□□□ 0.86
RTL9Q8NET4 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC20.4■□□□□ 0.86
RTL9Q8NET4 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC20.4■□□□□ 0.86
RTL9Q8NET4 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC20.4■□□□□ 0.86
RTL9Q8NET4 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
RTL9Q8NET4 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC20.4■□□□□ 0.86
RTL9Q8NET4 AL031731.1-201ENST00000642131 2094 ntBASIC20.4■□□□□ 0.86
RTL9Q8NET4 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC20.4■□□□□ 0.86
RTL9Q8NET4 BANP-227ENST00000626016 2144 ntTSL 2 BASIC20.4■□□□□ 0.86
RTL9Q8NET4 AC005332.8-201ENST00000622750 2735 ntBASIC20.4■□□□□ 0.86
RTL9Q8NET4 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
RTL9Q8NET4 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
RTL9Q8NET4 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
RTL9Q8NET4 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
RTL9Q8NET4 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
RTL9Q8NET4 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
RTL9Q8NET4 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC20.39■□□□□ 0.85
RTL9Q8NET4 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
RTL9Q8NET4 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
RTL9Q8NET4 AL080243.2-201ENST00000418783 582 ntBASIC20.39■□□□□ 0.85
RTL9Q8NET4 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC20.39■□□□□ 0.85
RTL9Q8NET4 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
RTL9Q8NET4 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
RTL9Q8NET4 TEX28P1-201ENST00000613479 1221 ntBASIC20.39■□□□□ 0.85
RTL9Q8NET4 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC20.39■□□□□ 0.85
RTL9Q8NET4 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC20.39■□□□□ 0.85
RTL9Q8NET4 TEX28P2-201ENST00000617764 1221 ntBASIC20.39■□□□□ 0.85
RTL9Q8NET4 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
RTL9Q8NET4 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC20.39■□□□□ 0.85
RTL9Q8NET4 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
RTL9Q8NET4 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
RTL9Q8NET4 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
RTL9Q8NET4 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
RTL9Q8NET4 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC20.39■□□□□ 0.85
RTL9Q8NET4 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
RTL9Q8NET4 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
RTL9Q8NET4 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
RTL9Q8NET4 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
RTL9Q8NET4 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
RTL9Q8NET4 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
RTL9Q8NET4 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
RTL9Q8NET4 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC20.38■□□□□ 0.85
RTL9Q8NET4 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
RTL9Q8NET4 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC20.38■□□□□ 0.85
RTL9Q8NET4 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
RTL9Q8NET4 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
RTL9Q8NET4 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
RTL9Q8NET4 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
RTL9Q8NET4 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC20.38■□□□□ 0.85
RTL9Q8NET4 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
RTL9Q8NET4 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC20.38■□□□□ 0.85
RTL9Q8NET4 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC20.38■□□□□ 0.85
RTL9Q8NET4 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC20.38■□□□□ 0.85
RTL9Q8NET4 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC20.38■□□□□ 0.85
RTL9Q8NET4 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
RTL9Q8NET4 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
RTL9Q8NET4 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
RTL9Q8NET4 AL844908.2-201ENST00000609461 460 ntBASIC20.38■□□□□ 0.85
RTL9Q8NET4 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
RTL9Q8NET4 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
RTL9Q8NET4 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
RTL9Q8NET4 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
RTL9Q8NET4 AC022144.1-201ENST00000602255 1580 ntBASIC20.38■□□□□ 0.85
RTL9Q8NET4 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC20.38■□□□□ 0.85
RTL9Q8NET4 AMT-206ENST00000458307 1860 ntTSL 2 BASIC20.38■□□□□ 0.85
RTL9Q8NET4 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
RTL9Q8NET4 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
RTL9Q8NET4 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
RTL9Q8NET4 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
RTL9Q8NET4 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
RTL9Q8NET4 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
RTL9Q8NET4 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
RTL9Q8NET4 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
RTL9Q8NET4 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
RTL9Q8NET4 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
RTL9Q8NET4 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
RTL9Q8NET4 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
RTL9Q8NET4 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC20.37■□□□□ 0.85
RTL9Q8NET4 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC20.37■□□□□ 0.85
RTL9Q8NET4 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC20.37■□□□□ 0.85
RTL9Q8NET4 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC20.37■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms