Protein–RNA interactions for Protein: Q8NDV3

SMC1B, Structural maintenance of chromosomes protein 1B, humanhuman

Predictions only

Length 1,235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1BQ8NDV3 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
SMC1BQ8NDV3 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
SMC1BQ8NDV3 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
SMC1BQ8NDV3 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SMC1BQ8NDV3 RANBP1-201ENST00000331821 837 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
SMC1BQ8NDV3 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC19.62■□□□□ 0.73
SMC1BQ8NDV3 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC19.62■□□□□ 0.73
SMC1BQ8NDV3 AC006003.1-201ENST00000448541 613 ntTSL 4 BASIC19.62■□□□□ 0.73
SMC1BQ8NDV3 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC19.62■□□□□ 0.73
SMC1BQ8NDV3 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC19.62■□□□□ 0.73
SMC1BQ8NDV3 RIT1-205ENST00000539040 919 ntTSL 2 BASIC19.62■□□□□ 0.73
SMC1BQ8NDV3 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
SMC1BQ8NDV3 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
SMC1BQ8NDV3 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC19.62■□□□□ 0.73
SMC1BQ8NDV3 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC19.62■□□□□ 0.73
SMC1BQ8NDV3 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
SMC1BQ8NDV3 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC19.62■□□□□ 0.73
SMC1BQ8NDV3 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
SMC1BQ8NDV3 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
SMC1BQ8NDV3 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC19.62■□□□□ 0.73
SMC1BQ8NDV3 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SMC1BQ8NDV3 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
SMC1BQ8NDV3 AC073592.3-201ENST00000625118 1834 ntBASIC19.62■□□□□ 0.73
SMC1BQ8NDV3 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
SMC1BQ8NDV3 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC19.62■□□□□ 0.73
SMC1BQ8NDV3 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
SMC1BQ8NDV3 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC19.61■□□□□ 0.73
SMC1BQ8NDV3 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC19.61■□□□□ 0.73
SMC1BQ8NDV3 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
SMC1BQ8NDV3 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC19.61■□□□□ 0.73
SMC1BQ8NDV3 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
SMC1BQ8NDV3 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SMC1BQ8NDV3 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
SMC1BQ8NDV3 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
SMC1BQ8NDV3 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC19.61■□□□□ 0.73
SMC1BQ8NDV3 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC19.61■□□□□ 0.73
SMC1BQ8NDV3 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC19.61■□□□□ 0.73
SMC1BQ8NDV3 PQBP1-201ENST00000218224 1113 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SMC1BQ8NDV3 PQBP1-202ENST00000247140 664 ntTSL 3 BASIC19.61■□□□□ 0.73
SMC1BQ8NDV3 CFLAR-203ENST00000341222 1283 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
SMC1BQ8NDV3 PQBP1-203ENST00000376563 1056 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
SMC1BQ8NDV3 PQBP1-204ENST00000376566 760 ntTSL 3 BASIC19.61■□□□□ 0.73
SMC1BQ8NDV3 PQBP1-205ENST00000396763 965 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
SMC1BQ8NDV3 HINT2P1-201ENST00000419438 481 ntBASIC19.61■□□□□ 0.73
SMC1BQ8NDV3 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC19.61■□□□□ 0.73
SMC1BQ8NDV3 PQBP1-207ENST00000447146 1020 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SMC1BQ8NDV3 RHOA-206ENST00000454011 889 ntTSL 2 BASIC19.61■□□□□ 0.73
SMC1BQ8NDV3 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC19.61■□□□□ 0.73
SMC1BQ8NDV3 AP001258.2-201ENST00000529891 490 ntBASIC19.61■□□□□ 0.73
SMC1BQ8NDV3 AC092337.1-201ENST00000568699 1129 ntBASIC19.61■□□□□ 0.73
SMC1BQ8NDV3 MPDU1-223ENST00000582151 728 ntBASIC19.61■□□□□ 0.73
SMC1BQ8NDV3 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC19.61■□□□□ 0.73
SMC1BQ8NDV3 LINC02028-216ENST00000609015 732 ntTSL 5 BASIC19.61■□□□□ 0.73
SMC1BQ8NDV3 ABBA01031660.1-201ENST00000635219 756 ntBASIC19.61■□□□□ 0.73
SMC1BQ8NDV3 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC19.61■□□□□ 0.73
SMC1BQ8NDV3 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SMC1BQ8NDV3 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
SMC1BQ8NDV3 EGFEM1P-202ENST00000431685 1563 ntBASIC19.61■□□□□ 0.73
SMC1BQ8NDV3 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
SMC1BQ8NDV3 ZNF711-201ENST00000276123 2887 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
SMC1BQ8NDV3 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC19.61■□□□□ 0.73
SMC1BQ8NDV3 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SMC1BQ8NDV3 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC19.61■□□□□ 0.73
SMC1BQ8NDV3 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
SMC1BQ8NDV3 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SMC1BQ8NDV3 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SMC1BQ8NDV3 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC19.61■□□□□ 0.73
SMC1BQ8NDV3 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC19.6■□□□□ 0.73
SMC1BQ8NDV3 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC19.6■□□□□ 0.73
SMC1BQ8NDV3 AC073439.1-201ENST00000624121 1774 ntBASIC19.6■□□□□ 0.73
SMC1BQ8NDV3 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
SMC1BQ8NDV3 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC19.6■□□□□ 0.73
SMC1BQ8NDV3 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC19.6■□□□□ 0.73
SMC1BQ8NDV3 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
SMC1BQ8NDV3 RPL13AP20-201ENST00000459725 609 ntBASIC19.6■□□□□ 0.73
SMC1BQ8NDV3 ARTN-209ENST00000479128 471 ntTSL 3 BASIC19.6■□□□□ 0.73
SMC1BQ8NDV3 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC19.6■□□□□ 0.73
SMC1BQ8NDV3 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC19.6■□□□□ 0.73
SMC1BQ8NDV3 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC19.6■□□□□ 0.73
SMC1BQ8NDV3 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC19.6■□□□□ 0.73
SMC1BQ8NDV3 AL583722.2-201ENST00000557223 663 ntTSL 3 BASIC19.6■□□□□ 0.73
SMC1BQ8NDV3 AC012568.1-201ENST00000558463 472 ntTSL 2 BASIC19.6■□□□□ 0.73
SMC1BQ8NDV3 CRISPLD2-210ENST00000569090 808 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
SMC1BQ8NDV3 MIR5189-201ENST00000577370 114 ntBASIC19.6■□□□□ 0.73
SMC1BQ8NDV3 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC19.6■□□□□ 0.73
SMC1BQ8NDV3 PSENEN-203ENST00000591949 833 ntTSL 2 BASIC19.6■□□□□ 0.73
SMC1BQ8NDV3 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
SMC1BQ8NDV3 LINC00623-205ENST00000621058 767 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
SMC1BQ8NDV3 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC19.6■□□□□ 0.73
SMC1BQ8NDV3 GOLGA2P9-201ENST00000596977 1937 ntBASIC19.6■□□□□ 0.73
SMC1BQ8NDV3 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
SMC1BQ8NDV3 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SMC1BQ8NDV3 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SMC1BQ8NDV3 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC19.6■□□□□ 0.73
SMC1BQ8NDV3 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC19.6■□□□□ 0.73
SMC1BQ8NDV3 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
SMC1BQ8NDV3 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SMC1BQ8NDV3 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC19.59■□□□□ 0.73
SMC1BQ8NDV3 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SMC1BQ8NDV3 AP003392.4-202ENST00000526453 1359 ntTSL 2 BASIC19.59■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 44.8 ms