Protein–RNA interactions for Protein: Q8N609

TRAM1L1, Translocating chain-associated membrane protein 1-like 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1L1Q8N609 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC16.46■□□□□ 0.23
TRAM1L1Q8N609 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC16.46■□□□□ 0.23
TRAM1L1Q8N609 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TRAM1L1Q8N609 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
TRAM1L1Q8N609 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TRAM1L1Q8N609 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TRAM1L1Q8N609 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
TRAM1L1Q8N609 AP006288.1-201ENST00000446065 395 ntBASIC16.46■□□□□ 0.23
TRAM1L1Q8N609 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TRAM1L1Q8N609 AC004967.1-201ENST00000453589 447 ntBASIC16.46■□□□□ 0.23
TRAM1L1Q8N609 INO80E-210ENST00000567705 880 ntTSL 3 BASIC16.46■□□□□ 0.23
TRAM1L1Q8N609 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC16.46■□□□□ 0.23
TRAM1L1Q8N609 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC16.46■□□□□ 0.23
TRAM1L1Q8N609 AC139530.3-201ENST00000620344 690 ntBASIC16.46■□□□□ 0.23
TRAM1L1Q8N609 AC134684.3-201ENST00000641758 218 ntBASIC16.46■□□□□ 0.23
TRAM1L1Q8N609 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TRAM1L1Q8N609 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
TRAM1L1Q8N609 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC16.46■□□□□ 0.23
TRAM1L1Q8N609 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TRAM1L1Q8N609 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
TRAM1L1Q8N609 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
TRAM1L1Q8N609 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC16.46■□□□□ 0.23
TRAM1L1Q8N609 GGT3P-204ENST00000453783 1664 ntBASIC16.46■□□□□ 0.23
TRAM1L1Q8N609 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC16.46■□□□□ 0.22
TRAM1L1Q8N609 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
TRAM1L1Q8N609 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
TRAM1L1Q8N609 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TRAM1L1Q8N609 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC16.45■□□□□ 0.22
TRAM1L1Q8N609 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC16.45■□□□□ 0.22
TRAM1L1Q8N609 BSG-215ENST00000618006 1329 ntTSL 2 BASIC16.45■□□□□ 0.22
TRAM1L1Q8N609 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
TRAM1L1Q8N609 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
TRAM1L1Q8N609 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
TRAM1L1Q8N609 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC16.45■□□□□ 0.22
TRAM1L1Q8N609 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
TRAM1L1Q8N609 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
TRAM1L1Q8N609 GCK-202ENST00000345378 2421 ntTSL 2 BASIC16.45■□□□□ 0.22
TRAM1L1Q8N609 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
TRAM1L1Q8N609 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
TRAM1L1Q8N609 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TRAM1L1Q8N609 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TRAM1L1Q8N609 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TRAM1L1Q8N609 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC16.45■□□□□ 0.22
TRAM1L1Q8N609 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC16.45■□□□□ 0.22
TRAM1L1Q8N609 TIMM8BP1-201ENST00000452384 211 ntBASIC16.45■□□□□ 0.22
TRAM1L1Q8N609 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC16.45■□□□□ 0.22
TRAM1L1Q8N609 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
TRAM1L1Q8N609 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC16.45■□□□□ 0.22
TRAM1L1Q8N609 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC16.45■□□□□ 0.22
TRAM1L1Q8N609 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC16.45■□□□□ 0.22
TRAM1L1Q8N609 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC16.45■□□□□ 0.22
TRAM1L1Q8N609 AC006538.3-201ENST00000612495 578 ntBASIC16.45■□□□□ 0.22
TRAM1L1Q8N609 AC105339.1-204ENST00000636249 355 ntBASIC16.45■□□□□ 0.22
TRAM1L1Q8N609 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TRAM1L1Q8N609 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
TRAM1L1Q8N609 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
TRAM1L1Q8N609 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC16.45■□□□□ 0.22
TRAM1L1Q8N609 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC16.45■□□□□ 0.22
TRAM1L1Q8N609 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC16.45■□□□□ 0.22
TRAM1L1Q8N609 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TRAM1L1Q8N609 NF2-208ENST00000403435 2568 ntTSL 5 BASIC16.45■□□□□ 0.22
TRAM1L1Q8N609 AC011676.5-201ENST00000624864 2660 ntBASIC16.45■□□□□ 0.22
TRAM1L1Q8N609 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC16.45■□□□□ 0.22
TRAM1L1Q8N609 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
TRAM1L1Q8N609 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
TRAM1L1Q8N609 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TRAM1L1Q8N609 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
TRAM1L1Q8N609 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TRAM1L1Q8N609 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC16.45■□□□□ 0.22
TRAM1L1Q8N609 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
TRAM1L1Q8N609 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
TRAM1L1Q8N609 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC16.45■□□□□ 0.22
TRAM1L1Q8N609 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TRAM1L1Q8N609 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TRAM1L1Q8N609 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
TRAM1L1Q8N609 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
TRAM1L1Q8N609 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC16.44■□□□□ 0.22
TRAM1L1Q8N609 UBALD1-205ENST00000590891 2641 ntBASIC16.44■□□□□ 0.22
TRAM1L1Q8N609 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
TRAM1L1Q8N609 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC16.44■□□□□ 0.22
TRAM1L1Q8N609 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
TRAM1L1Q8N609 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC16.44■□□□□ 0.22
TRAM1L1Q8N609 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC16.44■□□□□ 0.22
TRAM1L1Q8N609 STOM-202ENST00000347359 870 ntTSL 2 BASIC16.44■□□□□ 0.22
TRAM1L1Q8N609 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
TRAM1L1Q8N609 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TRAM1L1Q8N609 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
TRAM1L1Q8N609 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
TRAM1L1Q8N609 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TRAM1L1Q8N609 AC254562.1-201ENST00000417586 456 ntBASIC16.44■□□□□ 0.22
TRAM1L1Q8N609 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC16.44■□□□□ 0.22
TRAM1L1Q8N609 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC16.44■□□□□ 0.22
TRAM1L1Q8N609 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC16.44■□□□□ 0.22
TRAM1L1Q8N609 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC16.44■□□□□ 0.22
TRAM1L1Q8N609 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC16.44■□□□□ 0.22
TRAM1L1Q8N609 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC16.44■□□□□ 0.22
TRAM1L1Q8N609 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC16.44■□□□□ 0.22
TRAM1L1Q8N609 KRT8P48-201ENST00000515599 1220 ntBASIC16.44■□□□□ 0.22
TRAM1L1Q8N609 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
TRAM1L1Q8N609 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC16.44■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms