Protein–RNA interactions for Protein: Q8N3V7

SYNPO, Synaptopodin, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPOQ8N3V7 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
SYNPOQ8N3V7 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SYNPOQ8N3V7 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC16.9■□□□□ 0.3
SYNPOQ8N3V7 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
SYNPOQ8N3V7 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
SYNPOQ8N3V7 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC16.89■□□□□ 0.3
SYNPOQ8N3V7 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
SYNPOQ8N3V7 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
SYNPOQ8N3V7 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
SYNPOQ8N3V7 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
SYNPOQ8N3V7 AL023806.1-201ENST00000603994 1649 ntBASIC16.89■□□□□ 0.29
SYNPOQ8N3V7 LINC00895-201ENST00000629028 1637 ntBASIC16.89■□□□□ 0.29
SYNPOQ8N3V7 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC16.89■□□□□ 0.29
SYNPOQ8N3V7 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC16.89■□□□□ 0.29
SYNPOQ8N3V7 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SYNPOQ8N3V7 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
SYNPOQ8N3V7 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC16.89■□□□□ 0.29
SYNPOQ8N3V7 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC16.89■□□□□ 0.29
SYNPOQ8N3V7 AL353705.2-201ENST00000428243 662 ntBASIC16.89■□□□□ 0.29
SYNPOQ8N3V7 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC16.89■□□□□ 0.29
SYNPOQ8N3V7 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
SYNPOQ8N3V7 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC16.89■□□□□ 0.29
SYNPOQ8N3V7 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC16.89■□□□□ 0.29
SYNPOQ8N3V7 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC16.89■□□□□ 0.29
SYNPOQ8N3V7 MIR4492-201ENST00000581627 80 ntBASIC16.89■□□□□ 0.29
SYNPOQ8N3V7 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC16.89■□□□□ 0.29
SYNPOQ8N3V7 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SYNPOQ8N3V7 MIR6752-201ENST00000618442 71 ntBASIC16.89■□□□□ 0.29
SYNPOQ8N3V7 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
SYNPOQ8N3V7 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC16.89■□□□□ 0.29
SYNPOQ8N3V7 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SYNPOQ8N3V7 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC16.89■□□□□ 0.29
SYNPOQ8N3V7 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC16.89■□□□□ 0.29
SYNPOQ8N3V7 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SYNPOQ8N3V7 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
SYNPOQ8N3V7 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC16.89■□□□□ 0.29
SYNPOQ8N3V7 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SYNPOQ8N3V7 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
SYNPOQ8N3V7 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
SYNPOQ8N3V7 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SYNPOQ8N3V7 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
SYNPOQ8N3V7 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC16.89■□□□□ 0.29
SYNPOQ8N3V7 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
SYNPOQ8N3V7 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC16.88■□□□□ 0.29
SYNPOQ8N3V7 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC16.88■□□□□ 0.29
SYNPOQ8N3V7 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
SYNPOQ8N3V7 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC16.88■□□□□ 0.29
SYNPOQ8N3V7 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
SYNPOQ8N3V7 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC16.88■□□□□ 0.29
SYNPOQ8N3V7 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SYNPOQ8N3V7 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
SYNPOQ8N3V7 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC16.88■□□□□ 0.29
SYNPOQ8N3V7 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC16.88■□□□□ 0.29
SYNPOQ8N3V7 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC16.88■□□□□ 0.29
SYNPOQ8N3V7 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SYNPOQ8N3V7 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
SYNPOQ8N3V7 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC16.88■□□□□ 0.29
SYNPOQ8N3V7 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC16.88■□□□□ 0.29
SYNPOQ8N3V7 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
SYNPOQ8N3V7 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC16.88■□□□□ 0.29
SYNPOQ8N3V7 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC16.88■□□□□ 0.29
SYNPOQ8N3V7 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
SYNPOQ8N3V7 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC16.88■□□□□ 0.29
SYNPOQ8N3V7 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SYNPOQ8N3V7 AC009477.1-201ENST00000452936 217 ntBASIC16.88■□□□□ 0.29
SYNPOQ8N3V7 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC16.88■□□□□ 0.29
SYNPOQ8N3V7 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC16.88■□□□□ 0.29
SYNPOQ8N3V7 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC16.88■□□□□ 0.29
SYNPOQ8N3V7 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC16.88■□□□□ 0.29
SYNPOQ8N3V7 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC16.88■□□□□ 0.29
SYNPOQ8N3V7 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC16.88■□□□□ 0.29
SYNPOQ8N3V7 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC16.88■□□□□ 0.29
SYNPOQ8N3V7 AL008721.1-201ENST00000609964 604 ntBASIC16.88■□□□□ 0.29
SYNPOQ8N3V7 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
SYNPOQ8N3V7 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
SYNPOQ8N3V7 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
SYNPOQ8N3V7 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC16.88■□□□□ 0.29
SYNPOQ8N3V7 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC16.88■□□□□ 0.29
SYNPOQ8N3V7 AC087499.5-201ENST00000452760 1342 ntBASIC16.88■□□□□ 0.29
SYNPOQ8N3V7 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC16.88■□□□□ 0.29
SYNPOQ8N3V7 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
SYNPOQ8N3V7 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SYNPOQ8N3V7 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
SYNPOQ8N3V7 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
SYNPOQ8N3V7 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SYNPOQ8N3V7 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
SYNPOQ8N3V7 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
SYNPOQ8N3V7 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SYNPOQ8N3V7 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC16.88■□□□□ 0.29
SYNPOQ8N3V7 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
SYNPOQ8N3V7 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC16.87■□□□□ 0.29
SYNPOQ8N3V7 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
SYNPOQ8N3V7 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC16.87■□□□□ 0.29
SYNPOQ8N3V7 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
SYNPOQ8N3V7 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SYNPOQ8N3V7 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
SYNPOQ8N3V7 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SYNPOQ8N3V7 AL138688.1-201ENST00000624851 1594 ntBASIC16.87■□□□□ 0.29
SYNPOQ8N3V7 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
SYNPOQ8N3V7 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 49 ms