Protein–RNA interactions for Protein: Q8IW19

APLF, Aprataxin and PNK-like factor, humanhuman

Predicted RBP Predictions only

Length 511 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APLFQ8IW19 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC16.64■□□□□ 0.25
APLFQ8IW19 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
APLFQ8IW19 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC16.64■□□□□ 0.25
APLFQ8IW19 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
APLFQ8IW19 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC16.64■□□□□ 0.25
APLFQ8IW19 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC16.64■□□□□ 0.25
APLFQ8IW19 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC16.64■□□□□ 0.25
APLFQ8IW19 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
APLFQ8IW19 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
APLFQ8IW19 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
APLFQ8IW19 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
APLFQ8IW19 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
APLFQ8IW19 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC16.64■□□□□ 0.25
APLFQ8IW19 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
APLFQ8IW19 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
APLFQ8IW19 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC16.63■□□□□ 0.25
APLFQ8IW19 AC104109.2-201ENST00000602919 1418 ntBASIC16.63■□□□□ 0.25
APLFQ8IW19 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
APLFQ8IW19 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
APLFQ8IW19 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
APLFQ8IW19 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
APLFQ8IW19 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC16.63■□□□□ 0.25
APLFQ8IW19 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC16.63■□□□□ 0.25
APLFQ8IW19 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
APLFQ8IW19 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
APLFQ8IW19 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
APLFQ8IW19 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
APLFQ8IW19 CD9-202ENST00000382515 1229 ntTSL 5 BASIC16.63■□□□□ 0.25
APLFQ8IW19 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
APLFQ8IW19 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC16.63■□□□□ 0.25
APLFQ8IW19 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC16.63■□□□□ 0.25
APLFQ8IW19 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
APLFQ8IW19 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC16.63■□□□□ 0.25
APLFQ8IW19 RPS2P1-201ENST00000434010 821 ntBASIC16.63■□□□□ 0.25
APLFQ8IW19 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC16.63■□□□□ 0.25
APLFQ8IW19 PAM16-208ENST00000573553 722 ntTSL 2 BASIC16.63■□□□□ 0.25
APLFQ8IW19 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC16.63■□□□□ 0.25
APLFQ8IW19 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
APLFQ8IW19 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
APLFQ8IW19 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
APLFQ8IW19 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
APLFQ8IW19 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC16.63■□□□□ 0.25
APLFQ8IW19 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
APLFQ8IW19 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC16.63■□□□□ 0.25
APLFQ8IW19 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
APLFQ8IW19 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
APLFQ8IW19 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
APLFQ8IW19 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
APLFQ8IW19 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
APLFQ8IW19 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
APLFQ8IW19 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
APLFQ8IW19 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC16.62■□□□□ 0.25
APLFQ8IW19 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
APLFQ8IW19 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
APLFQ8IW19 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
APLFQ8IW19 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
APLFQ8IW19 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
APLFQ8IW19 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC16.62■□□□□ 0.25
APLFQ8IW19 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
APLFQ8IW19 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
APLFQ8IW19 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
APLFQ8IW19 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
APLFQ8IW19 SOD2-201ENST00000337404 991 ntTSL 2 BASIC16.62■□□□□ 0.25
APLFQ8IW19 LBH-204ENST00000406087 559 ntTSL 4 BASIC16.62■□□□□ 0.25
APLFQ8IW19 AC005104.2-201ENST00000427818 678 ntBASIC16.62■□□□□ 0.25
APLFQ8IW19 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC16.62■□□□□ 0.25
APLFQ8IW19 SRP19-202ENST00000445150 833 ntTSL 2 BASIC16.62■□□□□ 0.25
APLFQ8IW19 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC16.62■□□□□ 0.25
APLFQ8IW19 COX5A-202ENST00000562233 441 ntTSL 3 BASIC16.62■□□□□ 0.25
APLFQ8IW19 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC16.62■□□□□ 0.25
APLFQ8IW19 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
APLFQ8IW19 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC16.62■□□□□ 0.25
APLFQ8IW19 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
APLFQ8IW19 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC16.62■□□□□ 0.25
APLFQ8IW19 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC16.62■□□□□ 0.25
APLFQ8IW19 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
APLFQ8IW19 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
APLFQ8IW19 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
APLFQ8IW19 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC16.62■□□□□ 0.25
APLFQ8IW19 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
APLFQ8IW19 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
APLFQ8IW19 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC16.62■□□□□ 0.25
APLFQ8IW19 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
APLFQ8IW19 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
APLFQ8IW19 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
APLFQ8IW19 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC16.62■□□□□ 0.25
APLFQ8IW19 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC16.62■□□□□ 0.25
APLFQ8IW19 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC16.62■□□□□ 0.25
APLFQ8IW19 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC16.62■□□□□ 0.25
APLFQ8IW19 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
APLFQ8IW19 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC16.62■□□□□ 0.25
APLFQ8IW19 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
APLFQ8IW19 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
APLFQ8IW19 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
APLFQ8IW19 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
APLFQ8IW19 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
APLFQ8IW19 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC16.62■□□□□ 0.25
APLFQ8IW19 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
APLFQ8IW19 PAUPAR-201ENST00000630360 2965 ntBASIC16.62■□□□□ 0.25
APLFQ8IW19 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms