Protein–RNA interactions for Protein: Q8IVW4

CDKL3, Cyclin-dependent kinase-like 3, humanhuman

Predicted RBP Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL3Q8IVW4 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CDKL3Q8IVW4 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
CDKL3Q8IVW4 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC17.16■□□□□ 0.34
CDKL3Q8IVW4 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC17.16■□□□□ 0.34
CDKL3Q8IVW4 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
CDKL3Q8IVW4 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
CDKL3Q8IVW4 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
CDKL3Q8IVW4 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CDKL3Q8IVW4 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CDKL3Q8IVW4 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CDKL3Q8IVW4 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC17.16■□□□□ 0.34
CDKL3Q8IVW4 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CDKL3Q8IVW4 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CDKL3Q8IVW4 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
CDKL3Q8IVW4 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CDKL3Q8IVW4 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CDKL3Q8IVW4 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC17.16■□□□□ 0.34
CDKL3Q8IVW4 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CDKL3Q8IVW4 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC17.16■□□□□ 0.34
CDKL3Q8IVW4 VPS51-217ENST00000639871 243 ntTSL 5 BASIC17.16■□□□□ 0.34
CDKL3Q8IVW4 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CDKL3Q8IVW4 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC17.16■□□□□ 0.34
CDKL3Q8IVW4 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC17.16■□□□□ 0.34
CDKL3Q8IVW4 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC17.16■□□□□ 0.34
CDKL3Q8IVW4 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC17.16■□□□□ 0.34
CDKL3Q8IVW4 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC17.16■□□□□ 0.34
CDKL3Q8IVW4 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CDKL3Q8IVW4 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
CDKL3Q8IVW4 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CDKL3Q8IVW4 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CDKL3Q8IVW4 AL391005.1-201ENST00000623953 2435 ntBASIC17.16■□□□□ 0.34
CDKL3Q8IVW4 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CDKL3Q8IVW4 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
CDKL3Q8IVW4 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CDKL3Q8IVW4 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
CDKL3Q8IVW4 AC005052.1-201ENST00000625181 2492 ntBASIC17.15■□□□□ 0.34
CDKL3Q8IVW4 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CDKL3Q8IVW4 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
CDKL3Q8IVW4 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC17.15■□□□□ 0.34
CDKL3Q8IVW4 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC17.15■□□□□ 0.34
CDKL3Q8IVW4 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CDKL3Q8IVW4 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC17.15■□□□□ 0.34
CDKL3Q8IVW4 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CDKL3Q8IVW4 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CDKL3Q8IVW4 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CDKL3Q8IVW4 AC004870.1-201ENST00000315132 882 ntBASIC17.15■□□□□ 0.34
CDKL3Q8IVW4 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
CDKL3Q8IVW4 CENPM-204ENST00000402420 688 ntTSL 5 BASIC17.15■□□□□ 0.34
CDKL3Q8IVW4 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC17.15■□□□□ 0.34
CDKL3Q8IVW4 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC17.15■□□□□ 0.34
CDKL3Q8IVW4 AC012640.2-201ENST00000561606 901 ntBASIC17.15■□□□□ 0.34
CDKL3Q8IVW4 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC17.15■□□□□ 0.34
CDKL3Q8IVW4 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CDKL3Q8IVW4 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CDKL3Q8IVW4 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC17.15■□□□□ 0.34
CDKL3Q8IVW4 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CDKL3Q8IVW4 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CDKL3Q8IVW4 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CDKL3Q8IVW4 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC17.15■□□□□ 0.34
CDKL3Q8IVW4 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
CDKL3Q8IVW4 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.34
CDKL3Q8IVW4 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.34
CDKL3Q8IVW4 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
CDKL3Q8IVW4 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CDKL3Q8IVW4 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CDKL3Q8IVW4 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CDKL3Q8IVW4 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CDKL3Q8IVW4 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC17.14■□□□□ 0.33
CDKL3Q8IVW4 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CDKL3Q8IVW4 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC17.14■□□□□ 0.33
CDKL3Q8IVW4 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
CDKL3Q8IVW4 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CDKL3Q8IVW4 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CDKL3Q8IVW4 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC17.14■□□□□ 0.33
CDKL3Q8IVW4 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CDKL3Q8IVW4 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CDKL3Q8IVW4 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CDKL3Q8IVW4 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC17.14■□□□□ 0.33
CDKL3Q8IVW4 FAAHP1-202ENST00000446499 1238 ntBASIC17.14■□□□□ 0.33
CDKL3Q8IVW4 AC108073.2-201ENST00000464002 357 ntBASIC17.14■□□□□ 0.33
CDKL3Q8IVW4 MOK-208ENST00000519058 917 ntTSL 2 BASIC17.14■□□□□ 0.33
CDKL3Q8IVW4 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC17.14■□□□□ 0.33
CDKL3Q8IVW4 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
CDKL3Q8IVW4 CYB561-216ENST00000582297 897 ntTSL 3 BASIC17.14■□□□□ 0.33
CDKL3Q8IVW4 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC17.14■□□□□ 0.33
CDKL3Q8IVW4 WT1-AS_2.1-201ENST00000613208 137 ntBASIC17.14■□□□□ 0.33
CDKL3Q8IVW4 AL691432.3-201ENST00000621860 400 ntBASIC17.14■□□□□ 0.33
CDKL3Q8IVW4 AC148477.8-201ENST00000624298 468 ntBASIC17.14■□□□□ 0.33
CDKL3Q8IVW4 FAM215A-202ENST00000632077 792 ntBASIC17.14■□□□□ 0.33
CDKL3Q8IVW4 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CDKL3Q8IVW4 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC17.14■□□□□ 0.33
CDKL3Q8IVW4 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CDKL3Q8IVW4 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CDKL3Q8IVW4 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CDKL3Q8IVW4 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CDKL3Q8IVW4 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC17.14■□□□□ 0.33
CDKL3Q8IVW4 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CDKL3Q8IVW4 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
CDKL3Q8IVW4 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC17.14■□□□□ 0.33
CDKL3Q8IVW4 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms