Protein–RNA interactions for Protein: Q7RTS3

PTF1A, Pancreas transcription factor 1 subunit alpha, humanhuman

Predictions only

Length 328 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTF1AQ7RTS3 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC21.08■□□□□ 0.97
PTF1AQ7RTS3 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
PTF1AQ7RTS3 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC21.08■□□□□ 0.97
PTF1AQ7RTS3 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC21.08■□□□□ 0.97
PTF1AQ7RTS3 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC21.08■□□□□ 0.97
PTF1AQ7RTS3 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC21.08■□□□□ 0.97
PTF1AQ7RTS3 ZFR2-208ENST00000592398 532 ntTSL 5 BASIC21.08■□□□□ 0.97
PTF1AQ7RTS3 RPS15-212ENST00000593052 629 ntTSL 2 BASIC21.08■□□□□ 0.97
PTF1AQ7RTS3 AL021578.1-201ENST00000613646 709 ntBASIC21.08■□□□□ 0.97
PTF1AQ7RTS3 AC009542.2-202ENST00000619004 1067 ntBASIC21.08■□□□□ 0.97
PTF1AQ7RTS3 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC21.08■□□□□ 0.97
PTF1AQ7RTS3 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC21.08■□□□□ 0.96
PTF1AQ7RTS3 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
PTF1AQ7RTS3 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.96
PTF1AQ7RTS3 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
PTF1AQ7RTS3 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
PTF1AQ7RTS3 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC21.07■□□□□ 0.96
PTF1AQ7RTS3 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
PTF1AQ7RTS3 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
PTF1AQ7RTS3 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
PTF1AQ7RTS3 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
PTF1AQ7RTS3 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
PTF1AQ7RTS3 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
PTF1AQ7RTS3 AC127070.2-201ENST00000424075 555 ntTSL 2 BASIC21.07■□□□□ 0.96
PTF1AQ7RTS3 RPL13AP20-201ENST00000459725 609 ntBASIC21.07■□□□□ 0.96
PTF1AQ7RTS3 PTK7-212ENST00000476760 902 ntTSL 2 BASIC21.07■□□□□ 0.96
PTF1AQ7RTS3 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC21.07■□□□□ 0.96
PTF1AQ7RTS3 AC104596.2-201ENST00000512793 793 ntBASIC21.07■□□□□ 0.96
PTF1AQ7RTS3 TDH-203ENST00000531764 1110 ntBASIC21.07■□□□□ 0.96
PTF1AQ7RTS3 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC21.07■□□□□ 0.96
PTF1AQ7RTS3 LINC01115-203ENST00000606068 577 ntBASIC21.07■□□□□ 0.96
PTF1AQ7RTS3 CU634019.7-201ENST00000624153 1185 ntBASIC21.07■□□□□ 0.96
PTF1AQ7RTS3 FP236241.2-201ENST00000624906 1185 ntBASIC21.07■□□□□ 0.96
PTF1AQ7RTS3 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC21.07■□□□□ 0.96
PTF1AQ7RTS3 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
PTF1AQ7RTS3 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
PTF1AQ7RTS3 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
PTF1AQ7RTS3 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
PTF1AQ7RTS3 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
PTF1AQ7RTS3 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
PTF1AQ7RTS3 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC21.07■□□□□ 0.96
PTF1AQ7RTS3 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
PTF1AQ7RTS3 HMBS-216ENST00000543090 1347 ntTSL 5 BASIC21.06■□□□□ 0.96
PTF1AQ7RTS3 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
PTF1AQ7RTS3 KRT8P22-201ENST00000562317 1415 ntBASIC21.06■□□□□ 0.96
PTF1AQ7RTS3 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
PTF1AQ7RTS3 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC21.06■□□□□ 0.96
PTF1AQ7RTS3 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
PTF1AQ7RTS3 CCDC88B-201ENST00000301897 870 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
PTF1AQ7RTS3 APOC3-202ENST00000375345 604 ntTSL 5 BASIC21.06■□□□□ 0.96
PTF1AQ7RTS3 VMO1-203ENST00000416307 712 ntTSL 2 BASIC21.06■□□□□ 0.96
PTF1AQ7RTS3 AL365277.1-206ENST00000417869 487 ntTSL 3 BASIC21.06■□□□□ 0.96
PTF1AQ7RTS3 AL365277.1-204ENST00000450157 599 ntTSL 3 BASIC21.06■□□□□ 0.96
PTF1AQ7RTS3 TNFRSF14-AS1-206ENST00000452793 569 ntTSL 3 BASIC21.06■□□□□ 0.96
PTF1AQ7RTS3 AL365277.1-203ENST00000458207 693 ntTSL 3 BASIC21.06■□□□□ 0.96
PTF1AQ7RTS3 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC21.06■□□□□ 0.96
PTF1AQ7RTS3 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC21.06■□□□□ 0.96
PTF1AQ7RTS3 DBNDD1-206ENST00000568838 993 ntTSL 2 BASIC21.06■□□□□ 0.96
PTF1AQ7RTS3 PIGL-212ENST00000581006 554 ntTSL 4 BASIC21.06■□□□□ 0.96
PTF1AQ7RTS3 AC024267.1-201ENST00000582320 895 ntBASIC21.06■□□□□ 0.96
PTF1AQ7RTS3 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC21.06■□□□□ 0.96
PTF1AQ7RTS3 PPA1-206ENST00000625364 644 ntTSL 5 BASIC21.06■□□□□ 0.96
PTF1AQ7RTS3 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
PTF1AQ7RTS3 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
PTF1AQ7RTS3 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
PTF1AQ7RTS3 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
PTF1AQ7RTS3 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC21.05■□□□□ 0.96
PTF1AQ7RTS3 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
PTF1AQ7RTS3 AC016396.2-201ENST00000562575 1417 ntBASIC21.05■□□□□ 0.96
PTF1AQ7RTS3 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
PTF1AQ7RTS3 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
PTF1AQ7RTS3 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
PTF1AQ7RTS3 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
PTF1AQ7RTS3 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
PTF1AQ7RTS3 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC21.05■□□□□ 0.96
PTF1AQ7RTS3 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
PTF1AQ7RTS3 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
PTF1AQ7RTS3 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
PTF1AQ7RTS3 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC21.05■□□□□ 0.96
PTF1AQ7RTS3 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC21.05■□□□□ 0.96
PTF1AQ7RTS3 TIMM17BP1-201ENST00000545713 516 ntBASIC21.05■□□□□ 0.96
PTF1AQ7RTS3 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC21.05■□□□□ 0.96
PTF1AQ7RTS3 LINC02205-201ENST00000559752 239 ntTSL 5 BASIC21.05■□□□□ 0.96
PTF1AQ7RTS3 LINC01233-203ENST00000601708 494 ntTSL 3 BASIC21.05■□□□□ 0.96
PTF1AQ7RTS3 AC013467.2-201ENST00000605472 835 ntBASIC21.05■□□□□ 0.96
PTF1AQ7RTS3 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
PTF1AQ7RTS3 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
PTF1AQ7RTS3 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC21.05■□□□□ 0.96
PTF1AQ7RTS3 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC21.05■□□□□ 0.96
PTF1AQ7RTS3 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
PTF1AQ7RTS3 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC21.05■□□□□ 0.96
PTF1AQ7RTS3 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC21.05■□□□□ 0.96
PTF1AQ7RTS3 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
PTF1AQ7RTS3 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
PTF1AQ7RTS3 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC21.05■□□□□ 0.96
PTF1AQ7RTS3 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
PTF1AQ7RTS3 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
PTF1AQ7RTS3 AL136982.4-201ENST00000437689 1740 ntBASIC21.04■□□□□ 0.96
PTF1AQ7RTS3 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
PTF1AQ7RTS3 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms