Protein–RNA interactions for Protein: Q7L0R7

RNF44, RING finger protein 44, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF44Q7L0R7 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC16■□□□□ 0.15
RNF44Q7L0R7 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
RNF44Q7L0R7 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
RNF44Q7L0R7 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC16■□□□□ 0.15
RNF44Q7L0R7 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
RNF44Q7L0R7 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC16■□□□□ 0.15
RNF44Q7L0R7 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
RNF44Q7L0R7 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC16■□□□□ 0.15
RNF44Q7L0R7 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
RNF44Q7L0R7 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
RNF44Q7L0R7 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
RNF44Q7L0R7 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
RNF44Q7L0R7 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
RNF44Q7L0R7 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
RNF44Q7L0R7 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
RNF44Q7L0R7 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
RNF44Q7L0R7 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
RNF44Q7L0R7 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
RNF44Q7L0R7 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
RNF44Q7L0R7 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
RNF44Q7L0R7 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC15.99■□□□□ 0.15
RNF44Q7L0R7 ADH5P3-201ENST00000433842 1137 ntBASIC15.99■□□□□ 0.15
RNF44Q7L0R7 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
RNF44Q7L0R7 MIR4469-201ENST00000583919 79 ntBASIC15.99■□□□□ 0.15
RNF44Q7L0R7 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC15.99■□□□□ 0.15
RNF44Q7L0R7 AC006538.3-201ENST00000612495 578 ntBASIC15.99■□□□□ 0.15
RNF44Q7L0R7 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
RNF44Q7L0R7 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC15.99■□□□□ 0.15
RNF44Q7L0R7 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC15.99■□□□□ 0.15
RNF44Q7L0R7 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
RNF44Q7L0R7 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
RNF44Q7L0R7 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
RNF44Q7L0R7 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
RNF44Q7L0R7 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
RNF44Q7L0R7 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
RNF44Q7L0R7 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC15.99■□□□□ 0.15
RNF44Q7L0R7 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC15.99■□□□□ 0.15
RNF44Q7L0R7 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
RNF44Q7L0R7 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
RNF44Q7L0R7 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
RNF44Q7L0R7 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC15.99■□□□□ 0.15
RNF44Q7L0R7 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
RNF44Q7L0R7 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
RNF44Q7L0R7 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
RNF44Q7L0R7 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
RNF44Q7L0R7 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
RNF44Q7L0R7 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
RNF44Q7L0R7 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
RNF44Q7L0R7 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC15.98■□□□□ 0.15
RNF44Q7L0R7 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
RNF44Q7L0R7 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
RNF44Q7L0R7 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC15.98■□□□□ 0.15
RNF44Q7L0R7 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
RNF44Q7L0R7 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
RNF44Q7L0R7 CD82-202ENST00000342935 967 ntTSL 5 BASIC15.98■□□□□ 0.15
RNF44Q7L0R7 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
RNF44Q7L0R7 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
RNF44Q7L0R7 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
RNF44Q7L0R7 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
RNF44Q7L0R7 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
RNF44Q7L0R7 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC15.98■□□□□ 0.15
RNF44Q7L0R7 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC15.98■□□□□ 0.15
RNF44Q7L0R7 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC15.98■□□□□ 0.15
RNF44Q7L0R7 AL355306.1-201ENST00000415580 579 ntBASIC15.98■□□□□ 0.15
RNF44Q7L0R7 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC15.98■□□□□ 0.15
RNF44Q7L0R7 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
RNF44Q7L0R7 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC15.98■□□□□ 0.15
RNF44Q7L0R7 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC15.98■□□□□ 0.15
RNF44Q7L0R7 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC15.98■□□□□ 0.15
RNF44Q7L0R7 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
RNF44Q7L0R7 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC15.98■□□□□ 0.15
RNF44Q7L0R7 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC15.98■□□□□ 0.15
RNF44Q7L0R7 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC15.98■□□□□ 0.15
RNF44Q7L0R7 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC15.98■□□□□ 0.15
RNF44Q7L0R7 IGHV3OR16-6-201ENST00000568775 360 ntBASIC15.98■□□□□ 0.15
RNF44Q7L0R7 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC15.98■□□□□ 0.15
RNF44Q7L0R7 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC15.98■□□□□ 0.15
RNF44Q7L0R7 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
RNF44Q7L0R7 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
RNF44Q7L0R7 AC021097.1-201ENST00000607902 574 ntBASIC15.98■□□□□ 0.15
RNF44Q7L0R7 AC139530.3-201ENST00000620344 690 ntBASIC15.98■□□□□ 0.15
RNF44Q7L0R7 AC055717.3-201ENST00000622967 595 ntBASIC15.98■□□□□ 0.15
RNF44Q7L0R7 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
RNF44Q7L0R7 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
RNF44Q7L0R7 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
RNF44Q7L0R7 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
RNF44Q7L0R7 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
RNF44Q7L0R7 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
RNF44Q7L0R7 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC15.98■□□□□ 0.15
RNF44Q7L0R7 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
RNF44Q7L0R7 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
RNF44Q7L0R7 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC15.98■□□□□ 0.15
RNF44Q7L0R7 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
RNF44Q7L0R7 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC15.98■□□□□ 0.15
RNF44Q7L0R7 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
RNF44Q7L0R7 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
RNF44Q7L0R7 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
RNF44Q7L0R7 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC15.97■□□□□ 0.15
RNF44Q7L0R7 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC15.97■□□□□ 0.15
RNF44Q7L0R7 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC15.97■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 62.6 ms