Protein–RNA interactions for Protein: Q6NUI1

CCDC144NL, Putative coiled-coil domain-containing protein 144 N-terminal-like, humanhuman

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144NLQ6NUI1 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC13.56□□□□□ -0.24
CCDC144NLQ6NUI1 MIR3909-201ENST00000579518 119 ntBASIC13.56□□□□□ -0.24
CCDC144NLQ6NUI1 MIR4492-201ENST00000581627 80 ntBASIC13.56□□□□□ -0.24
CCDC144NLQ6NUI1 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC13.56□□□□□ -0.24
CCDC144NLQ6NUI1 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC13.56□□□□□ -0.24
CCDC144NLQ6NUI1 MED16-214ENST00000617672 554 ntTSL 5 BASIC13.56□□□□□ -0.24
CCDC144NLQ6NUI1 AC004877.2-201ENST00000623941 599 ntBASIC13.56□□□□□ -0.24
CCDC144NLQ6NUI1 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CCDC144NLQ6NUI1 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC13.56□□□□□ -0.24
CCDC144NLQ6NUI1 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
CCDC144NLQ6NUI1 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
CCDC144NLQ6NUI1 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
CCDC144NLQ6NUI1 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC13.56□□□□□ -0.24
CCDC144NLQ6NUI1 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CCDC144NLQ6NUI1 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CCDC144NLQ6NUI1 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CCDC144NLQ6NUI1 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CCDC144NLQ6NUI1 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
CCDC144NLQ6NUI1 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
CCDC144NLQ6NUI1 AC005915.1-201ENST00000624912 2018 ntBASIC13.56□□□□□ -0.24
CCDC144NLQ6NUI1 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
CCDC144NLQ6NUI1 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC13.56□□□□□ -0.24
CCDC144NLQ6NUI1 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC13.56□□□□□ -0.24
CCDC144NLQ6NUI1 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
CCDC144NLQ6NUI1 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CCDC144NLQ6NUI1 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
CCDC144NLQ6NUI1 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC13.55□□□□□ -0.24
CCDC144NLQ6NUI1 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CCDC144NLQ6NUI1 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC13.55□□□□□ -0.24
CCDC144NLQ6NUI1 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
CCDC144NLQ6NUI1 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
CCDC144NLQ6NUI1 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC13.55□□□□□ -0.24
CCDC144NLQ6NUI1 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CCDC144NLQ6NUI1 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
CCDC144NLQ6NUI1 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CCDC144NLQ6NUI1 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
CCDC144NLQ6NUI1 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
CCDC144NLQ6NUI1 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
CCDC144NLQ6NUI1 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
CCDC144NLQ6NUI1 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
CCDC144NLQ6NUI1 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CCDC144NLQ6NUI1 PMS2P4-201ENST00000412466 1052 ntBASIC13.55□□□□□ -0.24
CCDC144NLQ6NUI1 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC13.55□□□□□ -0.24
CCDC144NLQ6NUI1 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
CCDC144NLQ6NUI1 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
CCDC144NLQ6NUI1 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC13.55□□□□□ -0.24
CCDC144NLQ6NUI1 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC13.55□□□□□ -0.24
CCDC144NLQ6NUI1 KRT19P2-202ENST00000557173 1012 ntBASIC13.55□□□□□ -0.24
CCDC144NLQ6NUI1 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
CCDC144NLQ6NUI1 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC13.55□□□□□ -0.24
CCDC144NLQ6NUI1 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC13.55□□□□□ -0.24
CCDC144NLQ6NUI1 AC021097.1-201ENST00000607902 574 ntBASIC13.55□□□□□ -0.24
CCDC144NLQ6NUI1 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC13.55□□□□□ -0.24
CCDC144NLQ6NUI1 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
CCDC144NLQ6NUI1 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
CCDC144NLQ6NUI1 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC13.55□□□□□ -0.24
CCDC144NLQ6NUI1 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
CCDC144NLQ6NUI1 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
CCDC144NLQ6NUI1 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CCDC144NLQ6NUI1 SLC22A20-204ENST00000530038 1673 ntBASIC13.55□□□□□ -0.24
CCDC144NLQ6NUI1 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC13.55□□□□□ -0.24
CCDC144NLQ6NUI1 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC13.55□□□□□ -0.24
CCDC144NLQ6NUI1 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC13.55□□□□□ -0.24
CCDC144NLQ6NUI1 REM2-202ENST00000536884 1331 ntTSL 2 BASIC13.55□□□□□ -0.24
CCDC144NLQ6NUI1 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC13.55□□□□□ -0.24
CCDC144NLQ6NUI1 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC13.55□□□□□ -0.24
CCDC144NLQ6NUI1 AC025580.3-201ENST00000617932 1424 ntBASIC13.55□□□□□ -0.24
CCDC144NLQ6NUI1 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
CCDC144NLQ6NUI1 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
CCDC144NLQ6NUI1 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CCDC144NLQ6NUI1 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
CCDC144NLQ6NUI1 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
CCDC144NLQ6NUI1 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CCDC144NLQ6NUI1 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
CCDC144NLQ6NUI1 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CCDC144NLQ6NUI1 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC13.54□□□□□ -0.24
CCDC144NLQ6NUI1 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
CCDC144NLQ6NUI1 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
CCDC144NLQ6NUI1 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC13.54□□□□□ -0.24
CCDC144NLQ6NUI1 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
CCDC144NLQ6NUI1 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC13.54□□□□□ -0.24
CCDC144NLQ6NUI1 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
CCDC144NLQ6NUI1 AC068587.6-202ENST00000641839 5619 ntBASIC13.54□□□□□ -0.24
CCDC144NLQ6NUI1 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC13.54□□□□□ -0.24
CCDC144NLQ6NUI1 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
CCDC144NLQ6NUI1 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CCDC144NLQ6NUI1 HARS-204ENST00000438307 1789 ntTSL 2 BASIC13.54□□□□□ -0.24
CCDC144NLQ6NUI1 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
CCDC144NLQ6NUI1 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CCDC144NLQ6NUI1 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
CCDC144NLQ6NUI1 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC13.54□□□□□ -0.24
CCDC144NLQ6NUI1 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC13.54□□□□□ -0.24
CCDC144NLQ6NUI1 PDPK2P-202ENST00000562415 1191 ntBASIC13.54□□□□□ -0.24
CCDC144NLQ6NUI1 AC018845.2-201ENST00000568326 409 ntBASIC13.54□□□□□ -0.24
CCDC144NLQ6NUI1 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
CCDC144NLQ6NUI1 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
CCDC144NLQ6NUI1 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CCDC144NLQ6NUI1 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
CCDC144NLQ6NUI1 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
CCDC144NLQ6NUI1 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC13.54□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms