Protein–RNA interactions for Protein: Q5VWM5

PRAMEF9, PRAME family member 9/15, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF9Q5VWM5 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
PRAMEF9Q5VWM5 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
PRAMEF9Q5VWM5 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
PRAMEF9Q5VWM5 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PRAMEF9Q5VWM5 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC16.05■□□□□ 0.16
PRAMEF9Q5VWM5 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PRAMEF9Q5VWM5 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
PRAMEF9Q5VWM5 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PRAMEF9Q5VWM5 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
PRAMEF9Q5VWM5 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PRAMEF9Q5VWM5 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
PRAMEF9Q5VWM5 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PRAMEF9Q5VWM5 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PRAMEF9Q5VWM5 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PRAMEF9Q5VWM5 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC16.05■□□□□ 0.16
PRAMEF9Q5VWM5 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC16.05■□□□□ 0.16
PRAMEF9Q5VWM5 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PRAMEF9Q5VWM5 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PRAMEF9Q5VWM5 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PRAMEF9Q5VWM5 RNU1-129P-201ENST00000384064 167 ntBASIC16.05■□□□□ 0.16
PRAMEF9Q5VWM5 LBH-204ENST00000406087 559 ntTSL 4 BASIC16.05■□□□□ 0.16
PRAMEF9Q5VWM5 AC018845.2-201ENST00000568326 409 ntBASIC16.05■□□□□ 0.16
PRAMEF9Q5VWM5 U1.21-201ENST00000580816 167 ntBASIC16.05■□□□□ 0.16
PRAMEF9Q5VWM5 AP001350.2-201ENST00000625104 1094 ntBASIC16.05■□□□□ 0.16
PRAMEF9Q5VWM5 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
PRAMEF9Q5VWM5 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
PRAMEF9Q5VWM5 AC026691.1-201ENST00000602502 2017 ntBASIC16.05■□□□□ 0.16
PRAMEF9Q5VWM5 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PRAMEF9Q5VWM5 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
PRAMEF9Q5VWM5 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
PRAMEF9Q5VWM5 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC16.05■□□□□ 0.16
PRAMEF9Q5VWM5 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PRAMEF9Q5VWM5 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PRAMEF9Q5VWM5 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
PRAMEF9Q5VWM5 GCK-209ENST00000616242 2260 ntTSL 5 BASIC16.05■□□□□ 0.16
PRAMEF9Q5VWM5 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC16.04■□□□□ 0.16
PRAMEF9Q5VWM5 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC16.04■□□□□ 0.16
PRAMEF9Q5VWM5 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
PRAMEF9Q5VWM5 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PRAMEF9Q5VWM5 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
PRAMEF9Q5VWM5 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
PRAMEF9Q5VWM5 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PRAMEF9Q5VWM5 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
PRAMEF9Q5VWM5 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC16.04■□□□□ 0.16
PRAMEF9Q5VWM5 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
PRAMEF9Q5VWM5 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
PRAMEF9Q5VWM5 METTL26-205ENST00000397666 726 ntTSL 2 BASIC16.04■□□□□ 0.16
PRAMEF9Q5VWM5 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
PRAMEF9Q5VWM5 ATP6V0CP3-201ENST00000417255 467 ntBASIC16.04■□□□□ 0.16
PRAMEF9Q5VWM5 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
PRAMEF9Q5VWM5 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC16.04■□□□□ 0.16
PRAMEF9Q5VWM5 MTRF1LP2-201ENST00000506027 1122 ntBASIC16.04■□□□□ 0.16
PRAMEF9Q5VWM5 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC16.04■□□□□ 0.16
PRAMEF9Q5VWM5 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC16.04■□□□□ 0.16
PRAMEF9Q5VWM5 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC16.04■□□□□ 0.16
PRAMEF9Q5VWM5 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC16.04■□□□□ 0.16
PRAMEF9Q5VWM5 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC16.04■□□□□ 0.16
PRAMEF9Q5VWM5 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC16.04■□□□□ 0.16
PRAMEF9Q5VWM5 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PRAMEF9Q5VWM5 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
PRAMEF9Q5VWM5 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC16.04■□□□□ 0.16
PRAMEF9Q5VWM5 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
PRAMEF9Q5VWM5 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PRAMEF9Q5VWM5 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
PRAMEF9Q5VWM5 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC16.04■□□□□ 0.16
PRAMEF9Q5VWM5 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
PRAMEF9Q5VWM5 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
PRAMEF9Q5VWM5 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
PRAMEF9Q5VWM5 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
PRAMEF9Q5VWM5 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
PRAMEF9Q5VWM5 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
PRAMEF9Q5VWM5 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC16.03■□□□□ 0.16
PRAMEF9Q5VWM5 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC16.03■□□□□ 0.16
PRAMEF9Q5VWM5 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
PRAMEF9Q5VWM5 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PRAMEF9Q5VWM5 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
PRAMEF9Q5VWM5 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PRAMEF9Q5VWM5 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
PRAMEF9Q5VWM5 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
PRAMEF9Q5VWM5 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PRAMEF9Q5VWM5 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PRAMEF9Q5VWM5 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PRAMEF9Q5VWM5 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC16.03■□□□□ 0.16
PRAMEF9Q5VWM5 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
PRAMEF9Q5VWM5 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PRAMEF9Q5VWM5 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
PRAMEF9Q5VWM5 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC16.03■□□□□ 0.16
PRAMEF9Q5VWM5 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
PRAMEF9Q5VWM5 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC16.03■□□□□ 0.16
PRAMEF9Q5VWM5 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
PRAMEF9Q5VWM5 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
PRAMEF9Q5VWM5 AC026396.1-201ENST00000419388 421 ntBASIC16.03■□□□□ 0.16
PRAMEF9Q5VWM5 AL590627.1-203ENST00000421194 1026 ntBASIC16.03■□□□□ 0.16
PRAMEF9Q5VWM5 AC007967.2-201ENST00000432613 625 ntBASIC16.03■□□□□ 0.16
PRAMEF9Q5VWM5 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
PRAMEF9Q5VWM5 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC16.03■□□□□ 0.16
PRAMEF9Q5VWM5 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC16.03■□□□□ 0.16
PRAMEF9Q5VWM5 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC16.03■□□□□ 0.16
PRAMEF9Q5VWM5 AC064836.3-201ENST00000607928 673 ntBASIC16.03■□□□□ 0.16
PRAMEF9Q5VWM5 AQP6-205ENST00000618286 829 ntTSL 5 BASIC16.03■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 53.3 ms