Protein–RNA interactions for Protein: Q5FBB7

SGO1, Shugoshin 1, humanhuman

Predictions only

Length 561 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SGO1Q5FBB7 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SGO1Q5FBB7 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SGO1Q5FBB7 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC16.28■□□□□ 0.2
SGO1Q5FBB7 HIST2H3DP1-201ENST00000401004 416 ntBASIC16.28■□□□□ 0.2
SGO1Q5FBB7 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC16.28■□□□□ 0.2
SGO1Q5FBB7 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC16.28■□□□□ 0.2
SGO1Q5FBB7 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC16.28■□□□□ 0.2
SGO1Q5FBB7 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC16.28■□□□□ 0.2
SGO1Q5FBB7 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC16.28■□□□□ 0.2
SGO1Q5FBB7 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
SGO1Q5FBB7 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SGO1Q5FBB7 AC025062.2-201ENST00000605477 670 ntBASIC16.28■□□□□ 0.2
SGO1Q5FBB7 AC004706.3-202ENST00000621574 984 ntBASIC16.28■□□□□ 0.2
SGO1Q5FBB7 AC006504.4-201ENST00000592118 1568 ntBASIC16.28■□□□□ 0.2
SGO1Q5FBB7 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC16.28■□□□□ 0.2
SGO1Q5FBB7 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SGO1Q5FBB7 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
SGO1Q5FBB7 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC16.28■□□□□ 0.2
SGO1Q5FBB7 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
SGO1Q5FBB7 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SGO1Q5FBB7 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SGO1Q5FBB7 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC16.28■□□□□ 0.2
SGO1Q5FBB7 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC16.28■□□□□ 0.2
SGO1Q5FBB7 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SGO1Q5FBB7 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
SGO1Q5FBB7 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC16.28■□□□□ 0.2
SGO1Q5FBB7 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC16.28■□□□□ 0.2
SGO1Q5FBB7 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SGO1Q5FBB7 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
SGO1Q5FBB7 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
SGO1Q5FBB7 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SGO1Q5FBB7 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
SGO1Q5FBB7 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
SGO1Q5FBB7 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
SGO1Q5FBB7 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
SGO1Q5FBB7 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC16.27■□□□□ 0.2
SGO1Q5FBB7 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
SGO1Q5FBB7 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC16.27■□□□□ 0.2
SGO1Q5FBB7 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC16.27■□□□□ 0.2
SGO1Q5FBB7 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
SGO1Q5FBB7 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
SGO1Q5FBB7 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SGO1Q5FBB7 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SGO1Q5FBB7 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
SGO1Q5FBB7 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
SGO1Q5FBB7 RAB17-203ENST00000409576 466 ntTSL 3 BASIC16.27■□□□□ 0.2
SGO1Q5FBB7 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
SGO1Q5FBB7 ELK2BP-201ENST00000415014 1224 ntBASIC16.27■□□□□ 0.2
SGO1Q5FBB7 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC16.27■□□□□ 0.2
SGO1Q5FBB7 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
SGO1Q5FBB7 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
SGO1Q5FBB7 UNC93B7-201ENST00000509439 705 ntBASIC16.27■□□□□ 0.2
SGO1Q5FBB7 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
SGO1Q5FBB7 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC16.27■□□□□ 0.2
SGO1Q5FBB7 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
SGO1Q5FBB7 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC16.27■□□□□ 0.2
SGO1Q5FBB7 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC16.27■□□□□ 0.2
SGO1Q5FBB7 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC16.27■□□□□ 0.2
SGO1Q5FBB7 ABBA01031661.1-201ENST00000634362 1253 ntBASIC16.27■□□□□ 0.2
SGO1Q5FBB7 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
SGO1Q5FBB7 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC16.27■□□□□ 0.2
SGO1Q5FBB7 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SGO1Q5FBB7 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC16.27■□□□□ 0.2
SGO1Q5FBB7 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
SGO1Q5FBB7 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
SGO1Q5FBB7 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC16.27■□□□□ 0.19
SGO1Q5FBB7 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.19
SGO1Q5FBB7 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
SGO1Q5FBB7 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC16.27■□□□□ 0.19
SGO1Q5FBB7 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
SGO1Q5FBB7 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
SGO1Q5FBB7 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.19
SGO1Q5FBB7 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.19
SGO1Q5FBB7 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
SGO1Q5FBB7 AC006277.1-201ENST00000624348 1610 ntBASIC16.27■□□□□ 0.19
SGO1Q5FBB7 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
SGO1Q5FBB7 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC16.26■□□□□ 0.19
SGO1Q5FBB7 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
SGO1Q5FBB7 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC16.26■□□□□ 0.19
SGO1Q5FBB7 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
SGO1Q5FBB7 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC16.26■□□□□ 0.19
SGO1Q5FBB7 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
SGO1Q5FBB7 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
SGO1Q5FBB7 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SGO1Q5FBB7 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
SGO1Q5FBB7 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
SGO1Q5FBB7 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC16.26■□□□□ 0.19
SGO1Q5FBB7 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
SGO1Q5FBB7 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC16.26■□□□□ 0.19
SGO1Q5FBB7 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
SGO1Q5FBB7 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SGO1Q5FBB7 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
SGO1Q5FBB7 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
SGO1Q5FBB7 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
SGO1Q5FBB7 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC16.26■□□□□ 0.19
SGO1Q5FBB7 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SGO1Q5FBB7 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
SGO1Q5FBB7 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC16.26■□□□□ 0.19
SGO1Q5FBB7 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SGO1Q5FBB7 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 42.7 ms