Protein–RNA interactions for Protein: Q2M243

CCDC27, Coiled-coil domain-containing protein 27, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC27Q2M243 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
CCDC27Q2M243 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC21.62■■□□□ 1.05
CCDC27Q2M243 AC073439.1-201ENST00000624121 1774 ntBASIC21.62■■□□□ 1.05
CCDC27Q2M243 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CCDC27Q2M243 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CCDC27Q2M243 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CCDC27Q2M243 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CCDC27Q2M243 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC21.62■■□□□ 1.05
CCDC27Q2M243 COA5-202ENST00000409997 557 ntTSL 4 BASIC21.62■■□□□ 1.05
CCDC27Q2M243 TFAMP1-201ENST00000412727 736 ntBASIC21.62■■□□□ 1.05
CCDC27Q2M243 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC21.62■■□□□ 1.05
CCDC27Q2M243 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC21.62■■□□□ 1.05
CCDC27Q2M243 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC21.62■■□□□ 1.05
CCDC27Q2M243 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC21.62■■□□□ 1.05
CCDC27Q2M243 AC112482.1-201ENST00000492080 688 ntBASIC21.62■■□□□ 1.05
CCDC27Q2M243 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CCDC27Q2M243 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
CCDC27Q2M243 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC21.62■■□□□ 1.05
CCDC27Q2M243 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC21.62■■□□□ 1.05
CCDC27Q2M243 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC21.62■■□□□ 1.05
CCDC27Q2M243 CALM1-205ENST00000553542 877 ntTSL 5 BASIC21.62■■□□□ 1.05
CCDC27Q2M243 AC243562.1-201ENST00000560672 389 ntBASIC21.62■■□□□ 1.05
CCDC27Q2M243 AL135744.1-201ENST00000565098 629 ntBASIC21.62■■□□□ 1.05
CCDC27Q2M243 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC21.62■■□□□ 1.05
CCDC27Q2M243 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CCDC27Q2M243 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC21.62■■□□□ 1.05
CCDC27Q2M243 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC21.62■■□□□ 1.05
CCDC27Q2M243 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CCDC27Q2M243 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC21.62■■□□□ 1.05
CCDC27Q2M243 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC21.62■■□□□ 1.05
CCDC27Q2M243 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
CCDC27Q2M243 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC21.62■■□□□ 1.05
CCDC27Q2M243 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC21.62■■□□□ 1.05
CCDC27Q2M243 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
CCDC27Q2M243 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC21.62■■□□□ 1.05
CCDC27Q2M243 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC21.62■■□□□ 1.05
CCDC27Q2M243 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC21.61■■□□□ 1.05
CCDC27Q2M243 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
CCDC27Q2M243 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC21.61■■□□□ 1.05
CCDC27Q2M243 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
CCDC27Q2M243 MTHFR-217ENST00000641820 1569 ntBASIC21.61■■□□□ 1.05
CCDC27Q2M243 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC21.61■■□□□ 1.05
CCDC27Q2M243 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC21.61■■□□□ 1.05
CCDC27Q2M243 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CCDC27Q2M243 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CCDC27Q2M243 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
CCDC27Q2M243 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CCDC27Q2M243 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC21.61■■□□□ 1.05
CCDC27Q2M243 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC21.61■■□□□ 1.05
CCDC27Q2M243 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
CCDC27Q2M243 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
CCDC27Q2M243 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
CCDC27Q2M243 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
CCDC27Q2M243 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC21.61■■□□□ 1.05
CCDC27Q2M243 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC21.61■■□□□ 1.05
CCDC27Q2M243 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CCDC27Q2M243 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CCDC27Q2M243 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CCDC27Q2M243 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CCDC27Q2M243 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC21.61■■□□□ 1.05
CCDC27Q2M243 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
CCDC27Q2M243 UPF3AP3-201ENST00000420996 769 ntBASIC21.61■■□□□ 1.05
CCDC27Q2M243 LINC01225-203ENST00000563550 1244 ntBASIC21.61■■□□□ 1.05
CCDC27Q2M243 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC21.61■■□□□ 1.05
CCDC27Q2M243 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC21.61■■□□□ 1.05
CCDC27Q2M243 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC21.61■■□□□ 1.05
CCDC27Q2M243 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
CCDC27Q2M243 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
CCDC27Q2M243 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CCDC27Q2M243 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC21.61■■□□□ 1.05
CCDC27Q2M243 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC21.61■■□□□ 1.05
CCDC27Q2M243 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC21.61■■□□□ 1.05
CCDC27Q2M243 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
CCDC27Q2M243 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CCDC27Q2M243 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC21.61■■□□□ 1.05
CCDC27Q2M243 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
CCDC27Q2M243 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC21.61■■□□□ 1.05
CCDC27Q2M243 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC21.6■■□□□ 1.05
CCDC27Q2M243 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CCDC27Q2M243 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC21.6■■□□□ 1.05
CCDC27Q2M243 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
CCDC27Q2M243 BSG-215ENST00000618006 1329 ntTSL 2 BASIC21.6■■□□□ 1.05
CCDC27Q2M243 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CCDC27Q2M243 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
CCDC27Q2M243 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC21.6■■□□□ 1.05
CCDC27Q2M243 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
CCDC27Q2M243 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
CCDC27Q2M243 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC21.6■■□□□ 1.05
CCDC27Q2M243 RN7SL589P-201ENST00000481268 310 ntBASIC21.6■■□□□ 1.05
CCDC27Q2M243 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC21.6■■□□□ 1.05
CCDC27Q2M243 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC21.6■■□□□ 1.05
CCDC27Q2M243 AC026120.1-201ENST00000611536 926 ntBASIC21.6■■□□□ 1.05
CCDC27Q2M243 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC21.6■■□□□ 1.05
CCDC27Q2M243 AC084121.4-201ENST00000641598 221 ntBASIC21.6■■□□□ 1.05
CCDC27Q2M243 AF228730.8-201ENST00000642140 221 ntBASIC21.6■■□□□ 1.05
CCDC27Q2M243 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC21.6■■□□□ 1.05
CCDC27Q2M243 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC21.6■■□□□ 1.05
CCDC27Q2M243 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CCDC27Q2M243 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC21.6■■□□□ 1.05
CCDC27Q2M243 AC006449.5-201ENST00000610658 2098 ntBASIC21.6■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms