Protein–RNA interactions for Protein: P83916

CBX1, Chromobox protein homolog 1, humanhuman

Predictions only

Length 185 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1P83916 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC17.47■□□□□ 0.39
CBX1P83916 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC17.47■□□□□ 0.39
CBX1P83916 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CBX1P83916 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CBX1P83916 GCM2-201ENST00000379491 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CBX1P83916 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CBX1P83916 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CBX1P83916 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CBX1P83916 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
CBX1P83916 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC17.47■□□□□ 0.39
CBX1P83916 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC17.47■□□□□ 0.39
CBX1P83916 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
CBX1P83916 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC17.47■□□□□ 0.39
CBX1P83916 AP002490.2-201ENST00000524791 560 ntBASIC17.47■□□□□ 0.39
CBX1P83916 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC17.47■□□□□ 0.39
CBX1P83916 PHB2-213ENST00000546111 858 ntTSL 2 BASIC17.47■□□□□ 0.39
CBX1P83916 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC17.47■□□□□ 0.39
CBX1P83916 MDK-213ENST00000617138 635 ntTSL 2 BASIC17.47■□□□□ 0.39
CBX1P83916 KRT8P47-201ENST00000604727 1398 ntBASIC17.47■□□□□ 0.39
CBX1P83916 NRAS-201ENST00000369535 4449 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CBX1P83916 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CBX1P83916 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CBX1P83916 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC17.47■□□□□ 0.39
CBX1P83916 RFX2-222ENST00000592546 2578 ntAPPRIS ALT1 TSL 2 BASIC17.47■□□□□ 0.39
CBX1P83916 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CBX1P83916 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CBX1P83916 PDE8A-201ENST00000310298 3984 ntAPPRIS P4 TSL 1 (best) BASIC17.47■□□□□ 0.39
CBX1P83916 LIMS1-215ENST00000544547 4461 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CBX1P83916 GRID2IP-203ENST00000457091 3636 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
CBX1P83916 AC099521.3-201ENST00000624251 2938 ntBASIC17.47■□□□□ 0.39
CBX1P83916 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CBX1P83916 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
CBX1P83916 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
CBX1P83916 GRIK4-208ENST00000638419 3593 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
CBX1P83916 APLP2-203ENST00000338167 3270 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
CBX1P83916 PITRM1-206ENST00000451104 3183 ntTSL 2 BASIC17.46■□□□□ 0.39
CBX1P83916 ARPC4-TTLL3-201ENST00000397256 2466 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
CBX1P83916 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CBX1P83916 RAB11FIP1-201ENST00000287263 6253 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CBX1P83916 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
CBX1P83916 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC17.46■□□□□ 0.39
CBX1P83916 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC17.46■□□□□ 0.39
CBX1P83916 GLI2-210ENST00000452319 6799 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
CBX1P83916 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC17.46■□□□□ 0.39
CBX1P83916 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CBX1P83916 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CBX1P83916 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC17.46■□□□□ 0.39
CBX1P83916 BX276092.2-201ENST00000417668 665 ntBASIC17.46■□□□□ 0.39
CBX1P83916 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.39
CBX1P83916 KRT18P5-201ENST00000436075 1291 ntBASIC17.46■□□□□ 0.39
CBX1P83916 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CBX1P83916 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC17.46■□□□□ 0.39
CBX1P83916 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.39
CBX1P83916 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC17.46■□□□□ 0.39
CBX1P83916 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC17.46■□□□□ 0.39
CBX1P83916 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CBX1P83916 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC17.46■□□□□ 0.39
CBX1P83916 GPR68-203ENST00000531499 2859 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
CBX1P83916 MCRIP1-207ENST00000574190 2775 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
CBX1P83916 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC17.46■□□□□ 0.39
CBX1P83916 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC17.46■□□□□ 0.39
CBX1P83916 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
CBX1P83916 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CBX1P83916 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC17.46■□□□□ 0.39
CBX1P83916 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CBX1P83916 OSMR-201ENST00000274276 5539 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CBX1P83916 NPR1-202ENST00000368680 4236 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CBX1P83916 BX276092.7-203ENST00000637198 1536 ntBASIC17.46■□□□□ 0.39
CBX1P83916 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
CBX1P83916 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC17.46■□□□□ 0.39
CBX1P83916 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC17.46■□□□□ 0.39
CBX1P83916 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
CBX1P83916 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.38
CBX1P83916 AC020658.6-201ENST00000623564 1870 ntBASIC17.46■□□□□ 0.38
CBX1P83916 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
CBX1P83916 AC097376.2-205ENST00000610159 5334 ntBASIC17.45■□□□□ 0.38
CBX1P83916 AC005562.1-201ENST00000583030 3219 ntBASIC17.45■□□□□ 0.38
CBX1P83916 PTPA-205ENST00000357197 2653 ntTSL 2 BASIC17.45■□□□□ 0.38
CBX1P83916 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CBX1P83916 SLC27A4-201ENST00000300456 3028 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CBX1P83916 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CBX1P83916 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CBX1P83916 ZBTB20-215ENST00000481632 2800 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CBX1P83916 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC17.45■□□□□ 0.38
CBX1P83916 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CBX1P83916 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CBX1P83916 ZW10-201ENST00000200135 2992 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CBX1P83916 PRKN-204ENST00000366896 2514 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CBX1P83916 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
CBX1P83916 AC009690.1-201ENST00000379915 4374 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
CBX1P83916 OS9-204ENST00000389146 2091 ntTSL 2 BASIC17.45■□□□□ 0.38
CBX1P83916 AC093668.2-201ENST00000481893 3569 ntTSL 2 BASIC17.45■□□□□ 0.38
CBX1P83916 AC105052.1-201ENST00000519541 3569 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
CBX1P83916 NADSYN1-216ENST00000530055 2416 ntTSL 2 BASIC17.45■□□□□ 0.38
CBX1P83916 FGFR1-201ENST00000326324 3816 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CBX1P83916 FGFR1-204ENST00000356207 3824 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CBX1P83916 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
CBX1P83916 DERL1-203ENST00000419562 918 ntTSL 2 BASIC17.45■□□□□ 0.38
CBX1P83916 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC17.45■□□□□ 0.38
CBX1P83916 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC17.45■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 52 ms