Protein–RNA interactions for Protein: P62987

UBA52, Ubiquitin-60S ribosomal protein L40, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA52P62987 SCARNA2-201ENST00000458748 420 ntBASIC14.49□□□□□ -0.09
UBA52P62987 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
UBA52P62987 RPL13AP23-201ENST00000480739 586 ntBASIC14.49□□□□□ -0.09
UBA52P62987 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC14.49□□□□□ -0.09
UBA52P62987 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC14.49□□□□□ -0.09
UBA52P62987 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC14.49□□□□□ -0.09
UBA52P62987 MTDHP3-201ENST00000594186 672 ntBASIC14.49□□□□□ -0.09
UBA52P62987 AL049840.3-201ENST00000602669 611 ntBASIC14.49□□□□□ -0.09
UBA52P62987 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
UBA52P62987 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
UBA52P62987 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
UBA52P62987 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC14.49□□□□□ -0.09
UBA52P62987 ASL-204ENST00000395331 1538 ntTSL 5 BASIC14.49□□□□□ -0.09
UBA52P62987 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC14.49□□□□□ -0.09
UBA52P62987 AL365203.3-201ENST00000609742 2057 ntBASIC14.49□□□□□ -0.09
UBA52P62987 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
UBA52P62987 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
UBA52P62987 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
UBA52P62987 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC14.49□□□□□ -0.09
UBA52P62987 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
UBA52P62987 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
UBA52P62987 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC14.49□□□□□ -0.09
UBA52P62987 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
UBA52P62987 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC14.49□□□□□ -0.09
UBA52P62987 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
UBA52P62987 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
UBA52P62987 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
UBA52P62987 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
UBA52P62987 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC14.48□□□□□ -0.09
UBA52P62987 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
UBA52P62987 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
UBA52P62987 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
UBA52P62987 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC14.48□□□□□ -0.09
UBA52P62987 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC14.48□□□□□ -0.09
UBA52P62987 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC14.48□□□□□ -0.09
UBA52P62987 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
UBA52P62987 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
UBA52P62987 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
UBA52P62987 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
UBA52P62987 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
UBA52P62987 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
UBA52P62987 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC14.48□□□□□ -0.09
UBA52P62987 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC14.48□□□□□ -0.09
UBA52P62987 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC14.48□□□□□ -0.09
UBA52P62987 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
UBA52P62987 RPS2P28-201ENST00000314255 741 ntBASIC14.48□□□□□ -0.09
UBA52P62987 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
UBA52P62987 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
UBA52P62987 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
UBA52P62987 MIR940-201ENST00000401276 94 ntBASIC14.48□□□□□ -0.09
UBA52P62987 BX842568.4-201ENST00000421222 227 ntBASIC14.48□□□□□ -0.09
UBA52P62987 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC14.48□□□□□ -0.09
UBA52P62987 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC14.48□□□□□ -0.09
UBA52P62987 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
UBA52P62987 RPL18-209ENST00000550645 463 ntTSL 5 BASIC14.48□□□□□ -0.09
UBA52P62987 RPL18-214ENST00000552588 559 ntTSL 3 BASIC14.48□□□□□ -0.09
UBA52P62987 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC14.48□□□□□ -0.09
UBA52P62987 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC14.48□□□□□ -0.09
UBA52P62987 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC14.48□□□□□ -0.09
UBA52P62987 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
UBA52P62987 AC005336.2-201ENST00000593183 939 ntBASIC14.48□□□□□ -0.09
UBA52P62987 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC14.48□□□□□ -0.09
UBA52P62987 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC14.48□□□□□ -0.09
UBA52P62987 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC14.48□□□□□ -0.09
UBA52P62987 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC14.48□□□□□ -0.09
UBA52P62987 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
UBA52P62987 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
UBA52P62987 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
UBA52P62987 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC14.48□□□□□ -0.09
UBA52P62987 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
UBA52P62987 C1R-202ENST00000536053 2347 ntTSL 2 BASIC14.48□□□□□ -0.09
UBA52P62987 LINC02228-204ENST00000642115 2962 ntBASIC14.48□□□□□ -0.09
UBA52P62987 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
UBA52P62987 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
UBA52P62987 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
UBA52P62987 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
UBA52P62987 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
UBA52P62987 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
UBA52P62987 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
UBA52P62987 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
UBA52P62987 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC14.48□□□□□ -0.09
UBA52P62987 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
UBA52P62987 PAN3-AS1-201ENST00000563843 1351 ntBASIC14.47□□□□□ -0.09
UBA52P62987 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC14.47□□□□□ -0.09
UBA52P62987 UROS-202ENST00000368778 1556 ntTSL 2 BASIC14.47□□□□□ -0.09
UBA52P62987 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
UBA52P62987 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
UBA52P62987 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC14.47□□□□□ -0.09
UBA52P62987 MBP-202ENST00000355994 2772 ntTSL 5 BASIC14.47□□□□□ -0.09
UBA52P62987 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
UBA52P62987 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC14.47□□□□□ -0.09
UBA52P62987 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
UBA52P62987 RHBDF1P1-201ENST00000427504 1941 ntBASIC14.47□□□□□ -0.09
UBA52P62987 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
UBA52P62987 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
UBA52P62987 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
UBA52P62987 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
UBA52P62987 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC14.47□□□□□ -0.09
UBA52P62987 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
UBA52P62987 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 39.7 ms