Protein–RNA interactions for Protein: P54753

EPHB3, Ephrin type-B receptor 3, humanhuman

Predictions only

Length 998 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3P54753 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
EPHB3P54753 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
EPHB3P54753 AL353705.2-201ENST00000428243 662 ntBASIC17.35■□□□□ 0.37
EPHB3P54753 AC092580.3-201ENST00000430932 139 ntBASIC17.35■□□□□ 0.37
EPHB3P54753 AC241585.1-201ENST00000433527 519 ntBASIC17.35■□□□□ 0.37
EPHB3P54753 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
EPHB3P54753 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC17.35■□□□□ 0.37
EPHB3P54753 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC17.35■□□□□ 0.37
EPHB3P54753 AC098859.1-201ENST00000502915 1238 ntBASIC17.35■□□□□ 0.37
EPHB3P54753 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC17.35■□□□□ 0.37
EPHB3P54753 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
EPHB3P54753 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC17.35■□□□□ 0.37
EPHB3P54753 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
EPHB3P54753 FOXO1B-201ENST00000504678 1527 ntBASIC17.35■□□□□ 0.37
EPHB3P54753 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
EPHB3P54753 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
EPHB3P54753 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
EPHB3P54753 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC17.35■□□□□ 0.37
EPHB3P54753 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
EPHB3P54753 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC17.35■□□□□ 0.37
EPHB3P54753 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
EPHB3P54753 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
EPHB3P54753 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
EPHB3P54753 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
EPHB3P54753 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
EPHB3P54753 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
EPHB3P54753 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
EPHB3P54753 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC17.35■□□□□ 0.37
EPHB3P54753 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
EPHB3P54753 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
EPHB3P54753 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
EPHB3P54753 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
EPHB3P54753 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
EPHB3P54753 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
EPHB3P54753 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
EPHB3P54753 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
EPHB3P54753 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
EPHB3P54753 FAM220BP-201ENST00000377689 816 ntBASIC17.34■□□□□ 0.37
EPHB3P54753 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC17.34■□□□□ 0.37
EPHB3P54753 AC236430.1-201ENST00000402231 743 ntBASIC17.34■□□□□ 0.37
EPHB3P54753 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
EPHB3P54753 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
EPHB3P54753 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
EPHB3P54753 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC17.34■□□□□ 0.37
EPHB3P54753 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC17.34■□□□□ 0.37
EPHB3P54753 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC17.34■□□□□ 0.37
EPHB3P54753 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC17.34■□□□□ 0.37
EPHB3P54753 OARD1-208ENST00000469104 704 ntTSL 2 BASIC17.34■□□□□ 0.37
EPHB3P54753 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
EPHB3P54753 TERF1P3-201ENST00000505638 1227 ntBASIC17.34■□□□□ 0.37
EPHB3P54753 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC17.34■□□□□ 0.37
EPHB3P54753 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC17.34■□□□□ 0.37
EPHB3P54753 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC17.34■□□□□ 0.37
EPHB3P54753 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC17.34■□□□□ 0.37
EPHB3P54753 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
EPHB3P54753 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
EPHB3P54753 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
EPHB3P54753 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
EPHB3P54753 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
EPHB3P54753 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC17.33■□□□□ 0.37
EPHB3P54753 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
EPHB3P54753 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
EPHB3P54753 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
EPHB3P54753 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
EPHB3P54753 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC17.33■□□□□ 0.37
EPHB3P54753 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC17.33■□□□□ 0.37
EPHB3P54753 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC17.33■□□□□ 0.37
EPHB3P54753 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC17.33■□□□□ 0.37
EPHB3P54753 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
EPHB3P54753 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC17.33■□□□□ 0.36
EPHB3P54753 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
EPHB3P54753 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC17.33■□□□□ 0.36
EPHB3P54753 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
EPHB3P54753 KLK8-202ENST00000320838 456 ntTSL 5 BASIC17.33■□□□□ 0.36
EPHB3P54753 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC17.33■□□□□ 0.36
EPHB3P54753 AC002472.2-201ENST00000442739 958 ntBASIC17.33■□□□□ 0.36
EPHB3P54753 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC17.33■□□□□ 0.36
EPHB3P54753 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
EPHB3P54753 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC17.33■□□□□ 0.36
EPHB3P54753 RN7SL204P-201ENST00000582831 262 ntBASIC17.33■□□□□ 0.36
EPHB3P54753 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
EPHB3P54753 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
EPHB3P54753 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
EPHB3P54753 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC17.33■□□□□ 0.36
EPHB3P54753 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
EPHB3P54753 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
EPHB3P54753 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
EPHB3P54753 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC17.32■□□□□ 0.36
EPHB3P54753 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
EPHB3P54753 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
EPHB3P54753 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC17.32■□□□□ 0.36
EPHB3P54753 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
EPHB3P54753 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
EPHB3P54753 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC17.32■□□□□ 0.36
EPHB3P54753 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
EPHB3P54753 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
EPHB3P54753 AL035456.1-201ENST00000456064 1369 ntBASIC17.32■□□□□ 0.36
EPHB3P54753 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
EPHB3P54753 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC17.32■□□□□ 0.36
EPHB3P54753 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 43.8 ms