Protein–RNA interactions for Protein: P54289

CACNA2D1, Voltage-dependent calcium channel subunit alpha-2/delta-1, humanhuman

Predictions only

Length 1,103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA2D1P54289 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CACNA2D1P54289 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CACNA2D1P54289 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC17.69■□□□□ 0.42
CACNA2D1P54289 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC17.69■□□□□ 0.42
CACNA2D1P54289 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CACNA2D1P54289 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CACNA2D1P54289 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC17.69■□□□□ 0.42
CACNA2D1P54289 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC17.69■□□□□ 0.42
CACNA2D1P54289 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CACNA2D1P54289 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
CACNA2D1P54289 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CACNA2D1P54289 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CACNA2D1P54289 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CACNA2D1P54289 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CACNA2D1P54289 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CACNA2D1P54289 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CACNA2D1P54289 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
CACNA2D1P54289 AC105020.1-201ENST00000435356 2205 ntBASIC17.68■□□□□ 0.42
CACNA2D1P54289 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CACNA2D1P54289 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
CACNA2D1P54289 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC17.68■□□□□ 0.42
CACNA2D1P54289 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CACNA2D1P54289 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC17.68■□□□□ 0.42
CACNA2D1P54289 RNF216P1-203ENST00000404404 2427 ntBASIC17.68■□□□□ 0.42
CACNA2D1P54289 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CACNA2D1P54289 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CACNA2D1P54289 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CACNA2D1P54289 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CACNA2D1P54289 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC17.68■□□□□ 0.42
CACNA2D1P54289 AC004461.1-201ENST00000412461 403 ntBASIC17.68■□□□□ 0.42
CACNA2D1P54289 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CACNA2D1P54289 AC092474.2-201ENST00000424288 719 ntBASIC17.68■□□□□ 0.42
CACNA2D1P54289 PCDH8P1-201ENST00000428983 2773 ntBASIC17.68■□□□□ 0.42
CACNA2D1P54289 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CACNA2D1P54289 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
CACNA2D1P54289 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CACNA2D1P54289 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC17.68■□□□□ 0.42
CACNA2D1P54289 AC022145.2-201ENST00000598203 171 ntBASIC17.68■□□□□ 0.42
CACNA2D1P54289 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC17.68■□□□□ 0.42
CACNA2D1P54289 AL513210.1-201ENST00000629608 234 ntBASIC17.68■□□□□ 0.42
CACNA2D1P54289 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
CACNA2D1P54289 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CACNA2D1P54289 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CACNA2D1P54289 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CACNA2D1P54289 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CACNA2D1P54289 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC17.68■□□□□ 0.42
CACNA2D1P54289 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
CACNA2D1P54289 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC17.68■□□□□ 0.42
CACNA2D1P54289 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
CACNA2D1P54289 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CACNA2D1P54289 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CACNA2D1P54289 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
CACNA2D1P54289 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
CACNA2D1P54289 SLC9A3P2-201ENST00000447821 2021 ntBASIC17.67■□□□□ 0.42
CACNA2D1P54289 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
CACNA2D1P54289 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC17.67■□□□□ 0.42
CACNA2D1P54289 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
CACNA2D1P54289 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC17.67■□□□□ 0.42
CACNA2D1P54289 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC17.67■□□□□ 0.42
CACNA2D1P54289 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
CACNA2D1P54289 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC17.67■□□□□ 0.42
CACNA2D1P54289 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC17.67■□□□□ 0.42
CACNA2D1P54289 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC17.67■□□□□ 0.42
CACNA2D1P54289 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
CACNA2D1P54289 AC254562.1-201ENST00000417586 456 ntBASIC17.67■□□□□ 0.42
CACNA2D1P54289 CNN2P11-201ENST00000429351 262 ntBASIC17.67■□□□□ 0.42
CACNA2D1P54289 AL671277.1-201ENST00000429656 993 ntBASIC17.67■□□□□ 0.42
CACNA2D1P54289 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC17.67■□□□□ 0.42
CACNA2D1P54289 AC109635.5-201ENST00000533593 962 ntBASIC17.67■□□□□ 0.42
CACNA2D1P54289 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC17.67■□□□□ 0.42
CACNA2D1P54289 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC17.67■□□□□ 0.42
CACNA2D1P54289 AC013467.2-201ENST00000605472 835 ntBASIC17.67■□□□□ 0.42
CACNA2D1P54289 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC17.67■□□□□ 0.42
CACNA2D1P54289 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
CACNA2D1P54289 LINC00895-201ENST00000629028 1637 ntBASIC17.67■□□□□ 0.42
CACNA2D1P54289 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CACNA2D1P54289 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CACNA2D1P54289 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC17.67■□□□□ 0.42
CACNA2D1P54289 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CACNA2D1P54289 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC17.67■□□□□ 0.42
CACNA2D1P54289 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
CACNA2D1P54289 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
CACNA2D1P54289 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
CACNA2D1P54289 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC17.67■□□□□ 0.42
CACNA2D1P54289 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC17.67■□□□□ 0.42
CACNA2D1P54289 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CACNA2D1P54289 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC17.67■□□□□ 0.42
CACNA2D1P54289 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
CACNA2D1P54289 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CACNA2D1P54289 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CACNA2D1P54289 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC17.66■□□□□ 0.42
CACNA2D1P54289 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
CACNA2D1P54289 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
CACNA2D1P54289 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC17.66■□□□□ 0.42
CACNA2D1P54289 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CACNA2D1P54289 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
CACNA2D1P54289 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
CACNA2D1P54289 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CACNA2D1P54289 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CACNA2D1P54289 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms