Protein–RNA interactions for Protein: P51532

SMARCA4, Transcription activator BRG1, humanhuman

Predictions only

Length 1,647 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4P51532 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC29.29■■■□□ 2.28
SMARCA4P51532 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC29.29■■■□□ 2.28
SMARCA4P51532 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC29.29■■■□□ 2.28
SMARCA4P51532 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC29.29■■■□□ 2.28
SMARCA4P51532 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC29.28■■■□□ 2.28
SMARCA4P51532 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC29.28■■■□□ 2.28
SMARCA4P51532 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC29.28■■■□□ 2.28
SMARCA4P51532 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC29.28■■■□□ 2.28
SMARCA4P51532 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC29.28■■■□□ 2.28
SMARCA4P51532 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC29.28■■■□□ 2.28
SMARCA4P51532 CR381653.1-201ENST00000622961 812 ntTSL 3 BASIC29.28■■■□□ 2.28
SMARCA4P51532 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC29.28■■■□□ 2.28
SMARCA4P51532 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC29.28■■■□□ 2.28
SMARCA4P51532 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC29.28■■■□□ 2.28
SMARCA4P51532 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC29.28■■■□□ 2.28
SMARCA4P51532 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC29.28■■■□□ 2.28
SMARCA4P51532 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC29.28■■■□□ 2.28
SMARCA4P51532 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC29.28■■■□□ 2.28
SMARCA4P51532 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC29.28■■■□□ 2.28
SMARCA4P51532 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC29.27■■■□□ 2.28
SMARCA4P51532 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC29.27■■■□□ 2.28
SMARCA4P51532 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC29.27■■■□□ 2.28
SMARCA4P51532 APOC3-202ENST00000375345 604 ntTSL 5 BASIC29.27■■■□□ 2.28
SMARCA4P51532 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC29.27■■■□□ 2.28
SMARCA4P51532 AZGP1P1-201ENST00000411909 902 ntBASIC29.27■■■□□ 2.28
SMARCA4P51532 AF274855.1-203ENST00000424126 800 ntTSL 3 BASIC29.27■■■□□ 2.28
SMARCA4P51532 KLF2P4-201ENST00000451959 1225 ntBASIC29.27■■■□□ 2.28
SMARCA4P51532 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC29.27■■■□□ 2.28
SMARCA4P51532 AC068587.3-201ENST00000526613 355 ntBASIC29.27■■■□□ 2.28
SMARCA4P51532 PIGL-212ENST00000581006 554 ntTSL 4 BASIC29.27■■■□□ 2.28
SMARCA4P51532 AC114737.3-201ENST00000636708 570 ntTSL 4 BASIC29.27■■■□□ 2.28
SMARCA4P51532 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC29.27■■■□□ 2.28
SMARCA4P51532 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC29.27■■■□□ 2.28
SMARCA4P51532 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC29.27■■■□□ 2.28
SMARCA4P51532 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC29.27■■■□□ 2.28
SMARCA4P51532 AC005229.1-201ENST00000392885 409 ntBASIC29.27■■■□□ 2.28
SMARCA4P51532 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC29.27■■■□□ 2.28
SMARCA4P51532 DRGX-202ENST00000434016 955 ntAPPRIS P1 TSL 5 BASIC29.27■■■□□ 2.28
SMARCA4P51532 RPL13P2-201ENST00000440687 659 ntBASIC29.27■■■□□ 2.28
SMARCA4P51532 FO681548.1-201ENST00000455617 1132 ntBASIC29.27■■■□□ 2.28
SMARCA4P51532 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC29.27■■■□□ 2.28
SMARCA4P51532 AC009134.1-201ENST00000571939 443 ntTSL 3 BASIC29.27■■■□□ 2.28
SMARCA4P51532 AC003070.2-201ENST00000589730 386 ntTSL 3 BASIC29.27■■■□□ 2.28
SMARCA4P51532 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC29.27■■■□□ 2.28
SMARCA4P51532 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC29.27■■■□□ 2.28
SMARCA4P51532 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC29.26■■■□□ 2.28
SMARCA4P51532 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC29.26■■■□□ 2.28
SMARCA4P51532 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC29.26■■■□□ 2.28
SMARCA4P51532 FO393414.2-201ENST00000405153 598 ntBASIC29.26■■■□□ 2.27
SMARCA4P51532 MIR1247-201ENST00000408206 136 ntBASIC29.26■■■□□ 2.27
SMARCA4P51532 RN7SL399P-201ENST00000471648 279 ntBASIC29.26■■■□□ 2.27
SMARCA4P51532 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC29.26■■■□□ 2.27
SMARCA4P51532 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC29.26■■■□□ 2.27
SMARCA4P51532 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC29.26■■■□□ 2.27
SMARCA4P51532 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC29.26■■■□□ 2.27
SMARCA4P51532 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC29.26■■■□□ 2.27
SMARCA4P51532 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC29.25■■■□□ 2.27
SMARCA4P51532 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC29.25■■■□□ 2.27
SMARCA4P51532 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC29.25■■■□□ 2.27
SMARCA4P51532 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC29.25■■■□□ 2.27
SMARCA4P51532 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC29.25■■■□□ 2.27
SMARCA4P51532 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC29.25■■■□□ 2.27
SMARCA4P51532 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC29.25■■■□□ 2.27
SMARCA4P51532 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC29.25■■■□□ 2.27
SMARCA4P51532 AP002748.3-205ENST00000525142 567 ntTSL 3 BASIC29.25■■■□□ 2.27
SMARCA4P51532 AP002748.3-203ENST00000533502 581 ntTSL 3 BASIC29.25■■■□□ 2.27
SMARCA4P51532 APRT-204ENST00000563655 709 ntTSL 5 BASIC29.25■■■□□ 2.27
SMARCA4P51532 DERL2-202ENST00000570848 657 ntTSL 5 BASIC29.25■■■□□ 2.27
SMARCA4P51532 GNRHR2-203ENST00000581100 1187 ntBASIC29.25■■■□□ 2.27
SMARCA4P51532 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC29.25■■■□□ 2.27
SMARCA4P51532 LINC00623-205ENST00000621058 767 ntTSL 1 (best) BASIC29.25■■■□□ 2.27
SMARCA4P51532 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC29.25■■■□□ 2.27
SMARCA4P51532 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC29.25■■■□□ 2.27
SMARCA4P51532 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC29.24■■■□□ 2.27
SMARCA4P51532 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC29.24■■■□□ 2.27
SMARCA4P51532 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC29.24■■■□□ 2.27
SMARCA4P51532 AC018685.1-201ENST00000457813 368 ntTSL 3 BASIC29.24■■■□□ 2.27
SMARCA4P51532 AC104596.2-201ENST00000512793 793 ntBASIC29.24■■■□□ 2.27
SMARCA4P51532 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC29.24■■■□□ 2.27
SMARCA4P51532 SUOX-214ENST00000551841 906 ntTSL 3 BASIC29.24■■■□□ 2.27
SMARCA4P51532 RN7SL219P-201ENST00000582872 296 ntBASIC29.24■■■□□ 2.27
SMARCA4P51532 CU634019.7-201ENST00000624153 1185 ntBASIC29.24■■■□□ 2.27
SMARCA4P51532 FP236241.2-201ENST00000624906 1185 ntBASIC29.24■■■□□ 2.27
SMARCA4P51532 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC29.24■■■□□ 2.27
SMARCA4P51532 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC29.24■■■□□ 2.27
SMARCA4P51532 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC29.24■■■□□ 2.27
SMARCA4P51532 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC29.24■■■□□ 2.27
SMARCA4P51532 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC29.24■■■□□ 2.27
SMARCA4P51532 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC29.24■■■□□ 2.27
SMARCA4P51532 RPL7P3-201ENST00000441388 714 ntBASIC29.23■■■□□ 2.27
SMARCA4P51532 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC29.23■■■□□ 2.27
SMARCA4P51532 AC012322.1-201ENST00000561657 861 ntTSL 3 BASIC29.23■■■□□ 2.27
SMARCA4P51532 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC29.23■■■□□ 2.27
SMARCA4P51532 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC29.23■■■□□ 2.27
SMARCA4P51532 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC29.23■■■□□ 2.27
SMARCA4P51532 AL139099.5-201ENST00000635274 300 ntBASIC29.23■■■□□ 2.27
SMARCA4P51532 CALM1-216ENST00000626705 1341 ntTSL 5 BASIC29.23■■■□□ 2.27
SMARCA4P51532 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC29.23■■■□□ 2.27
SMARCA4P51532 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC29.23■■■□□ 2.27
SMARCA4P51532 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC29.23■■■□□ 2.27
Retrieved 100 of 98,524 protein–RNA pairs in 69.6 ms