Protein–RNA interactions for Protein: P49450

CENPA, Histone H3-like centromeric protein A, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPAP49450 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC15.22■□□□□ 0.03
CENPAP49450 AC078925.2-201ENST00000624013 1973 ntBASIC15.22■□□□□ 0.03
CENPAP49450 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CENPAP49450 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CENPAP49450 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC15.22■□□□□ 0.03
CENPAP49450 HELZ2-204ENST00000467148 8064 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CENPAP49450 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
CENPAP49450 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
CENPAP49450 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC15.21■□□□□ 0.03
CENPAP49450 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CENPAP49450 TCHH-201ENST00000368804 6900 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
CENPAP49450 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CENPAP49450 SMAD2-202ENST00000356825 10445 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CENPAP49450 AL603756.1-201ENST00000606511 2163 ntBASIC15.21■□□□□ 0.03
CENPAP49450 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.03
CENPAP49450 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CENPAP49450 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CENPAP49450 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CENPAP49450 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC15.21■□□□□ 0.03
CENPAP49450 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CENPAP49450 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC15.21■□□□□ 0.03
CENPAP49450 SPDYE21P-201ENST00000413323 827 ntBASIC15.21■□□□□ 0.03
CENPAP49450 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
CENPAP49450 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC15.21■□□□□ 0.03
CENPAP49450 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC15.21■□□□□ 0.03
CENPAP49450 NT5C-211ENST00000582170 653 ntTSL 3 BASIC15.21■□□□□ 0.03
CENPAP49450 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC15.21■□□□□ 0.03
CENPAP49450 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC15.21■□□□□ 0.03
CENPAP49450 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC15.21■□□□□ 0.03
CENPAP49450 AP000867.4-201ENST00000641616 219 ntBASIC15.21■□□□□ 0.03
CENPAP49450 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CENPAP49450 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
CENPAP49450 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CENPAP49450 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC15.21■□□□□ 0.03
CENPAP49450 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC15.21■□□□□ 0.03
CENPAP49450 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC15.21■□□□□ 0.03
CENPAP49450 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CENPAP49450 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CENPAP49450 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC15.21■□□□□ 0.03
CENPAP49450 ZNF516-201ENST00000443185 8118 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CENPAP49450 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
CENPAP49450 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.02
CENPAP49450 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
CENPAP49450 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC15.21■□□□□ 0.02
CENPAP49450 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
CENPAP49450 SYNRG-217ENST00000612223 8229 ntAPPRIS P4 TSL 1 (best) BASIC15.21■□□□□ 0.02
CENPAP49450 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
CENPAP49450 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CENPAP49450 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CENPAP49450 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CENPAP49450 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CENPAP49450 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC15.2■□□□□ 0.02
CENPAP49450 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
CENPAP49450 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
CENPAP49450 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CENPAP49450 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CENPAP49450 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
CENPAP49450 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CENPAP49450 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC15.2■□□□□ 0.02
CENPAP49450 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CENPAP49450 MED16-201ENST00000269814 1199 ntTSL 5 BASIC15.2■□□□□ 0.02
CENPAP49450 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
CENPAP49450 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CENPAP49450 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
CENPAP49450 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC15.2■□□□□ 0.02
CENPAP49450 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC15.2■□□□□ 0.02
CENPAP49450 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC15.2■□□□□ 0.02
CENPAP49450 FOSL1P1-201ENST00000511041 816 ntBASIC15.2■□□□□ 0.02
CENPAP49450 AC010331.1-201ENST00000611423 582 ntBASIC15.2■□□□□ 0.02
CENPAP49450 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
CENPAP49450 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC15.2■□□□□ 0.02
CENPAP49450 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC15.2■□□□□ 0.02
CENPAP49450 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CENPAP49450 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC15.2■□□□□ 0.02
CENPAP49450 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CENPAP49450 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CENPAP49450 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC15.2■□□□□ 0.02
CENPAP49450 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
CENPAP49450 PCDHB17P-201ENST00000539533 2393 ntBASIC15.2■□□□□ 0.02
CENPAP49450 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC15.2■□□□□ 0.02
CENPAP49450 AC004817.3-201ENST00000602957 2129 ntBASIC15.2■□□□□ 0.02
CENPAP49450 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC15.2■□□□□ 0.02
CENPAP49450 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CENPAP49450 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CENPAP49450 AL662899.1-201ENST00000461287 2332 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
CENPAP49450 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
CENPAP49450 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC15.2■□□□□ 0.02
CENPAP49450 TRIM45-201ENST00000256649 3515 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CENPAP49450 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC15.19■□□□□ 0.02
CENPAP49450 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC15.19■□□□□ 0.02
CENPAP49450 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC15.19■□□□□ 0.02
CENPAP49450 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC15.19■□□□□ 0.02
CENPAP49450 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CENPAP49450 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC15.19■□□□□ 0.02
CENPAP49450 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CENPAP49450 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CENPAP49450 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC15.19■□□□□ 0.02
CENPAP49450 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CENPAP49450 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
CENPAP49450 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC15.19■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 49.9 ms