Protein–RNA interactions for Protein: P42898

MTHFR, Methylenetetrahydrofolate reductase, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFRP42898 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
MTHFRP42898 CETN4P-206ENST00000642099 2168 ntBASIC17.41■□□□□ 0.38
MTHFRP42898 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
MTHFRP42898 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
MTHFRP42898 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
MTHFRP42898 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
MTHFRP42898 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC17.41■□□□□ 0.38
MTHFRP42898 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC17.41■□□□□ 0.38
MTHFRP42898 IGHV3-71-201ENST00000523324 359 ntBASIC17.41■□□□□ 0.38
MTHFRP42898 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC17.41■□□□□ 0.38
MTHFRP42898 PRR29-204ENST00000577953 565 ntTSL 4 BASIC17.41■□□□□ 0.38
MTHFRP42898 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
MTHFRP42898 AL132655.2-201ENST00000596276 594 ntBASIC17.41■□□□□ 0.38
MTHFRP42898 AC138969.3-201ENST00000546612 1459 ntBASIC17.41■□□□□ 0.38
MTHFRP42898 AC138932.2-201ENST00000548268 1459 ntBASIC17.41■□□□□ 0.38
MTHFRP42898 AC126755.4-201ENST00000549796 1459 ntBASIC17.41■□□□□ 0.38
MTHFRP42898 AC007541.1-201ENST00000570282 1469 ntBASIC17.41■□□□□ 0.38
MTHFRP42898 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
MTHFRP42898 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
MTHFRP42898 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
MTHFRP42898 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
MTHFRP42898 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC17.41■□□□□ 0.38
MTHFRP42898 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
MTHFRP42898 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
MTHFRP42898 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
MTHFRP42898 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
MTHFRP42898 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
MTHFRP42898 SLC9A3P2-201ENST00000447821 2021 ntBASIC17.4■□□□□ 0.38
MTHFRP42898 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
MTHFRP42898 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
MTHFRP42898 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
MTHFRP42898 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
MTHFRP42898 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
MTHFRP42898 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
MTHFRP42898 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
MTHFRP42898 U91328.1-201ENST00000437528 223 ntBASIC17.4■□□□□ 0.38
MTHFRP42898 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
MTHFRP42898 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC17.4■□□□□ 0.38
MTHFRP42898 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC17.4■□□□□ 0.38
MTHFRP42898 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC17.4■□□□□ 0.38
MTHFRP42898 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC17.4■□□□□ 0.38
MTHFRP42898 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
MTHFRP42898 CYP2A7P1-201ENST00000595391 815 ntBASIC17.4■□□□□ 0.38
MTHFRP42898 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
MTHFRP42898 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
MTHFRP42898 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC17.4■□□□□ 0.38
MTHFRP42898 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC17.4■□□□□ 0.38
MTHFRP42898 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
MTHFRP42898 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
MTHFRP42898 GNE-204ENST00000539208 2190 ntTSL 2 BASIC17.4■□□□□ 0.38
MTHFRP42898 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
MTHFRP42898 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
MTHFRP42898 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
MTHFRP42898 CEP83-AS1-201ENST00000623122 2482 ntBASIC17.4■□□□□ 0.38
MTHFRP42898 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
MTHFRP42898 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC17.4■□□□□ 0.38
MTHFRP42898 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
MTHFRP42898 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.38
MTHFRP42898 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
MTHFRP42898 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.38
MTHFRP42898 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
MTHFRP42898 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
MTHFRP42898 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
MTHFRP42898 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
MTHFRP42898 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.37
MTHFRP42898 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC17.39■□□□□ 0.37
MTHFRP42898 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
MTHFRP42898 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC17.39■□□□□ 0.37
MTHFRP42898 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC17.39■□□□□ 0.37
MTHFRP42898 AC009407.1-201ENST00000568958 598 ntBASIC17.39■□□□□ 0.37
MTHFRP42898 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
MTHFRP42898 TEX28P1-201ENST00000613479 1221 ntBASIC17.39■□□□□ 0.37
MTHFRP42898 TEX28P2-201ENST00000617764 1221 ntBASIC17.39■□□□□ 0.37
MTHFRP42898 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC17.39■□□□□ 0.37
MTHFRP42898 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC17.39■□□□□ 0.37
MTHFRP42898 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
MTHFRP42898 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
MTHFRP42898 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
MTHFRP42898 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
MTHFRP42898 AL021920.2-201ENST00000624828 1351 ntBASIC17.39■□□□□ 0.37
MTHFRP42898 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC17.39■□□□□ 0.37
MTHFRP42898 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
MTHFRP42898 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
MTHFRP42898 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
MTHFRP42898 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
MTHFRP42898 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
MTHFRP42898 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
MTHFRP42898 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC17.38■□□□□ 0.37
MTHFRP42898 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
MTHFRP42898 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC17.38■□□□□ 0.37
MTHFRP42898 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC17.38■□□□□ 0.37
MTHFRP42898 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC17.38■□□□□ 0.37
MTHFRP42898 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
MTHFRP42898 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
MTHFRP42898 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
MTHFRP42898 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
MTHFRP42898 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
MTHFRP42898 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
MTHFRP42898 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC17.38■□□□□ 0.37
MTHFRP42898 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC17.38■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 58.3 ms