Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC20.94■□□□□ 0.94
COL15A1P39059 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
COL15A1P39059 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC20.94■□□□□ 0.94
COL15A1P39059 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC20.94■□□□□ 0.94
COL15A1P39059 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
COL15A1P39059 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC20.94■□□□□ 0.94
COL15A1P39059 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
COL15A1P39059 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC20.94■□□□□ 0.94
COL15A1P39059 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
COL15A1P39059 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
COL15A1P39059 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
COL15A1P39059 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
COL15A1P39059 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC20.93■□□□□ 0.94
COL15A1P39059 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
COL15A1P39059 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
COL15A1P39059 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC20.93■□□□□ 0.94
COL15A1P39059 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
COL15A1P39059 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
COL15A1P39059 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
COL15A1P39059 DPM2-202ENST00000373110 738 ntTSL 2 BASIC20.93■□□□□ 0.94
COL15A1P39059 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
COL15A1P39059 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
COL15A1P39059 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC20.93■□□□□ 0.94
COL15A1P39059 DGCR5-201ENST00000399539 862 ntBASIC20.93■□□□□ 0.94
COL15A1P39059 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
COL15A1P39059 PGF-202ENST00000405431 666 ntTSL 5 BASIC20.93■□□□□ 0.94
COL15A1P39059 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC20.93■□□□□ 0.94
COL15A1P39059 RN7SL618P-201ENST00000477850 296 ntBASIC20.93■□□□□ 0.94
COL15A1P39059 GIMAP3P-201ENST00000495150 836 ntBASIC20.93■□□□□ 0.94
COL15A1P39059 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC20.93■□□□□ 0.94
COL15A1P39059 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC20.93■□□□□ 0.94
COL15A1P39059 HILS1-202ENST00000545329 423 ntBASIC20.93■□□□□ 0.94
COL15A1P39059 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC20.93■□□□□ 0.94
COL15A1P39059 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
COL15A1P39059 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
COL15A1P39059 PCDHB17P-201ENST00000539533 2393 ntBASIC20.93■□□□□ 0.94
COL15A1P39059 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
COL15A1P39059 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
COL15A1P39059 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
COL15A1P39059 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
COL15A1P39059 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC20.92■□□□□ 0.94
COL15A1P39059 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
COL15A1P39059 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC20.92■□□□□ 0.94
COL15A1P39059 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC20.92■□□□□ 0.94
COL15A1P39059 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
COL15A1P39059 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
COL15A1P39059 RPS19-201ENST00000221975 500 ntTSL 3 BASIC20.92■□□□□ 0.94
COL15A1P39059 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
COL15A1P39059 AC098614.1-201ENST00000368528 745 ntBASIC20.92■□□□□ 0.94
COL15A1P39059 RBM39-205ENST00000397370 612 ntTSL 2 BASIC20.92■□□□□ 0.94
COL15A1P39059 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC20.92■□□□□ 0.94
COL15A1P39059 RASL12-203ENST00000434605 982 ntTSL 2 BASIC20.92■□□□□ 0.94
COL15A1P39059 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC20.92■□□□□ 0.94
COL15A1P39059 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC20.92■□□□□ 0.94
COL15A1P39059 FHL2-212ENST00000607522 759 ntTSL 2 BASIC20.92■□□□□ 0.94
COL15A1P39059 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC20.92■□□□□ 0.94
COL15A1P39059 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC20.92■□□□□ 0.94
COL15A1P39059 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
COL15A1P39059 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
COL15A1P39059 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC20.92■□□□□ 0.94
COL15A1P39059 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC20.92■□□□□ 0.94
COL15A1P39059 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
COL15A1P39059 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
COL15A1P39059 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC20.92■□□□□ 0.94
COL15A1P39059 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC20.92■□□□□ 0.94
COL15A1P39059 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
COL15A1P39059 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
COL15A1P39059 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
COL15A1P39059 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
COL15A1P39059 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC20.91■□□□□ 0.94
COL15A1P39059 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC20.91■□□□□ 0.94
COL15A1P39059 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC20.91■□□□□ 0.94
COL15A1P39059 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
COL15A1P39059 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
COL15A1P39059 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC20.91■□□□□ 0.94
COL15A1P39059 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
COL15A1P39059 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
COL15A1P39059 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC20.91■□□□□ 0.94
COL15A1P39059 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
COL15A1P39059 INE1-201ENST00000456273 945 ntBASIC20.91■□□□□ 0.94
COL15A1P39059 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
COL15A1P39059 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC20.91■□□□□ 0.94
COL15A1P39059 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC20.91■□□□□ 0.94
COL15A1P39059 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC20.91■□□□□ 0.94
COL15A1P39059 POLE2-203ENST00000553805 496 ntTSL 2 BASIC20.91■□□□□ 0.94
COL15A1P39059 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
COL15A1P39059 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC20.91■□□□□ 0.94
COL15A1P39059 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC20.91■□□□□ 0.94
COL15A1P39059 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
COL15A1P39059 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
COL15A1P39059 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC20.91■□□□□ 0.94
COL15A1P39059 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
COL15A1P39059 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
COL15A1P39059 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
COL15A1P39059 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
COL15A1P39059 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC20.91■□□□□ 0.94
COL15A1P39059 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
COL15A1P39059 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
COL15A1P39059 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC20.91■□□□□ 0.94
COL15A1P39059 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC20.9■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms