Protein–RNA interactions for Protein: P35527

KRT9, Keratin, type I cytoskeletal 9, humanhuman

Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT9P35527 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC18.32■□□□□ 0.52
KRT9P35527 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
KRT9P35527 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
KRT9P35527 AC105917.1-201ENST00000506637 2539 ntBASIC18.31■□□□□ 0.52
KRT9P35527 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
KRT9P35527 HYMAI-201ENST00000635591 3347 ntBASIC18.31■□□□□ 0.52
KRT9P35527 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
KRT9P35527 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
KRT9P35527 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
KRT9P35527 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC18.31■□□□□ 0.52
KRT9P35527 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
KRT9P35527 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC18.31■□□□□ 0.52
KRT9P35527 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC18.31■□□□□ 0.52
KRT9P35527 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
KRT9P35527 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC18.31■□□□□ 0.52
KRT9P35527 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
KRT9P35527 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
KRT9P35527 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
KRT9P35527 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC18.31■□□□□ 0.52
KRT9P35527 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC18.31■□□□□ 0.52
KRT9P35527 SAPCD2P3-201ENST00000455031 850 ntBASIC18.31■□□□□ 0.52
KRT9P35527 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC18.31■□□□□ 0.52
KRT9P35527 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC18.31■□□□□ 0.52
KRT9P35527 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC18.31■□□□□ 0.52
KRT9P35527 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC18.31■□□□□ 0.52
KRT9P35527 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC18.31■□□□□ 0.52
KRT9P35527 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC18.31■□□□□ 0.52
KRT9P35527 AC013467.2-201ENST00000605472 835 ntBASIC18.31■□□□□ 0.52
KRT9P35527 AL139011.1-202ENST00000642063 584 ntBASIC18.31■□□□□ 0.52
KRT9P35527 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
KRT9P35527 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC18.31■□□□□ 0.52
KRT9P35527 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
KRT9P35527 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
KRT9P35527 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
KRT9P35527 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
KRT9P35527 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC18.31■□□□□ 0.52
KRT9P35527 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
KRT9P35527 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC18.31■□□□□ 0.52
KRT9P35527 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
KRT9P35527 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
KRT9P35527 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC18.31■□□□□ 0.52
KRT9P35527 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
KRT9P35527 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC18.31■□□□□ 0.52
KRT9P35527 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC18.31■□□□□ 0.52
KRT9P35527 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
KRT9P35527 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
KRT9P35527 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
KRT9P35527 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
KRT9P35527 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
KRT9P35527 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
KRT9P35527 AC243591.1-201ENST00000452967 1364 ntBASIC18.3■□□□□ 0.52
KRT9P35527 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC18.3■□□□□ 0.52
KRT9P35527 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
KRT9P35527 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
KRT9P35527 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
KRT9P35527 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
KRT9P35527 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
KRT9P35527 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
KRT9P35527 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
KRT9P35527 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
KRT9P35527 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
KRT9P35527 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC18.3■□□□□ 0.52
KRT9P35527 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
KRT9P35527 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
KRT9P35527 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC18.3■□□□□ 0.52
KRT9P35527 SCARNA2-201ENST00000458748 420 ntBASIC18.3■□□□□ 0.52
KRT9P35527 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC18.3■□□□□ 0.52
KRT9P35527 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
KRT9P35527 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC18.3■□□□□ 0.52
KRT9P35527 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC18.3■□□□□ 0.52
KRT9P35527 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
KRT9P35527 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
KRT9P35527 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
KRT9P35527 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
KRT9P35527 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
KRT9P35527 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
KRT9P35527 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
KRT9P35527 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC18.3■□□□□ 0.52
KRT9P35527 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
KRT9P35527 AC024909.3-201ENST00000611513 2257 ntBASIC18.3■□□□□ 0.52
KRT9P35527 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC18.3■□□□□ 0.52
KRT9P35527 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
KRT9P35527 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
KRT9P35527 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC18.3■□□□□ 0.52
KRT9P35527 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
KRT9P35527 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
KRT9P35527 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
KRT9P35527 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
KRT9P35527 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
KRT9P35527 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC18.29■□□□□ 0.52
KRT9P35527 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
KRT9P35527 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC18.29■□□□□ 0.52
KRT9P35527 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
KRT9P35527 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC18.29■□□□□ 0.52
KRT9P35527 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC18.29■□□□□ 0.52
KRT9P35527 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC18.29■□□□□ 0.52
KRT9P35527 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC18.29■□□□□ 0.52
KRT9P35527 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC18.29■□□□□ 0.52
KRT9P35527 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC18.29■□□□□ 0.52
KRT9P35527 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 51.9 ms