Protein–RNA interactions for Protein: P31275

HOXC12, Homeobox protein Hox-C12, humanhuman

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC12P31275 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
HOXC12P31275 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
HOXC12P31275 PDPK2P-202ENST00000562415 1191 ntBASIC14.83□□□□□ -0.04
HOXC12P31275 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC14.83□□□□□ -0.04
HOXC12P31275 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC14.83□□□□□ -0.04
HOXC12P31275 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC14.83□□□□□ -0.04
HOXC12P31275 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
HOXC12P31275 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
HOXC12P31275 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
HOXC12P31275 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
HOXC12P31275 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC14.83□□□□□ -0.04
HOXC12P31275 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
HOXC12P31275 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC14.83□□□□□ -0.04
HOXC12P31275 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC14.83□□□□□ -0.04
HOXC12P31275 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
HOXC12P31275 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
HOXC12P31275 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
HOXC12P31275 TOP3BP1-201ENST00000420768 1380 ntBASIC14.83□□□□□ -0.04
HOXC12P31275 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
HOXC12P31275 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
HOXC12P31275 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
HOXC12P31275 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC14.83□□□□□ -0.04
HOXC12P31275 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
HOXC12P31275 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
HOXC12P31275 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC14.83□□□□□ -0.04
HOXC12P31275 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
HOXC12P31275 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
HOXC12P31275 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
HOXC12P31275 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC14.82□□□□□ -0.04
HOXC12P31275 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC14.82□□□□□ -0.04
HOXC12P31275 FRMD8P1-201ENST00000440433 1524 ntBASIC14.82□□□□□ -0.04
HOXC12P31275 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
HOXC12P31275 RHBDF1P1-201ENST00000427504 1941 ntBASIC14.82□□□□□ -0.04
HOXC12P31275 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC14.82□□□□□ -0.04
HOXC12P31275 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
HOXC12P31275 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
HOXC12P31275 AL139400.1-201ENST00000366220 510 ntBASIC14.82□□□□□ -0.04
HOXC12P31275 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
HOXC12P31275 SLC25A1P3-201ENST00000395415 828 ntBASIC14.82□□□□□ -0.04
HOXC12P31275 IGLL3P-201ENST00000412472 434 ntBASIC14.82□□□□□ -0.04
HOXC12P31275 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC14.82□□□□□ -0.04
HOXC12P31275 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC14.82□□□□□ -0.04
HOXC12P31275 FAM185BP-201ENST00000443595 716 ntBASIC14.82□□□□□ -0.04
HOXC12P31275 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC14.82□□□□□ -0.04
HOXC12P31275 HLA-J-203ENST00000494367 1087 ntBASIC14.82□□□□□ -0.04
HOXC12P31275 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC14.82□□□□□ -0.04
HOXC12P31275 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC14.82□□□□□ -0.04
HOXC12P31275 POLD4-207ENST00000531239 584 ntTSL 2 BASIC14.82□□□□□ -0.04
HOXC12P31275 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
HOXC12P31275 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC14.82□□□□□ -0.04
HOXC12P31275 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC14.82□□□□□ -0.04
HOXC12P31275 PRR29-209ENST00000582540 967 ntTSL 2 BASIC14.82□□□□□ -0.04
HOXC12P31275 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC14.82□□□□□ -0.04
HOXC12P31275 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
HOXC12P31275 BSG-214ENST00000614867 960 ntTSL 3 BASIC14.82□□□□□ -0.04
HOXC12P31275 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC14.82□□□□□ -0.04
HOXC12P31275 AC004877.2-201ENST00000623941 599 ntBASIC14.82□□□□□ -0.04
HOXC12P31275 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
HOXC12P31275 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC14.82□□□□□ -0.04
HOXC12P31275 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
HOXC12P31275 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
HOXC12P31275 PP12613-201ENST00000424958 2230 ntBASIC14.82□□□□□ -0.04
HOXC12P31275 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
HOXC12P31275 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC14.82□□□□□ -0.04
HOXC12P31275 AC067930.6-201ENST00000623257 4947 ntBASIC14.82□□□□□ -0.04
HOXC12P31275 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
HOXC12P31275 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
HOXC12P31275 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC14.82□□□□□ -0.04
HOXC12P31275 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
HOXC12P31275 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC14.82□□□□□ -0.04
HOXC12P31275 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
HOXC12P31275 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
HOXC12P31275 AL353732.1-201ENST00000569618 1459 ntBASIC14.82□□□□□ -0.04
HOXC12P31275 UBR2-201ENST00000372899 7857 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
HOXC12P31275 UBR2-202ENST00000372901 7857 ntAPPRIS ALT1 TSL 5 BASIC14.82□□□□□ -0.04
HOXC12P31275 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC14.82□□□□□ -0.04
HOXC12P31275 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
HOXC12P31275 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
HOXC12P31275 SPAG9-201ENST00000262013 8273 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
HOXC12P31275 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
HOXC12P31275 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
HOXC12P31275 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
HOXC12P31275 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
HOXC12P31275 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
HOXC12P31275 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
HOXC12P31275 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
HOXC12P31275 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
HOXC12P31275 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
HOXC12P31275 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
HOXC12P31275 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC14.81□□□□□ -0.04
HOXC12P31275 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
HOXC12P31275 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
HOXC12P31275 NEK7-201ENST00000367383 586 ntTSL 2 BASIC14.81□□□□□ -0.04
HOXC12P31275 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC14.81□□□□□ -0.04
HOXC12P31275 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC14.81□□□□□ -0.04
HOXC12P31275 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
HOXC12P31275 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC14.81□□□□□ -0.04
HOXC12P31275 HCG4-201ENST00000418983 998 ntBASIC14.81□□□□□ -0.04
HOXC12P31275 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC14.81□□□□□ -0.04
HOXC12P31275 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms