Protein–RNA interactions for Protein: P26640

VARS, Valine--tRNA ligase, humanhuman

Known RBP Predictions only

Length 1,264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARSP26640 RPL18-209ENST00000550645 463 ntTSL 5 BASIC16.48■□□□□ 0.23
VARSP26640 RPL18-214ENST00000552588 559 ntTSL 3 BASIC16.48■□□□□ 0.23
VARSP26640 AC145285.3-201ENST00000564603 959 ntBASIC16.48■□□□□ 0.23
VARSP26640 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC16.48■□□□□ 0.23
VARSP26640 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC16.48■□□□□ 0.23
VARSP26640 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
VARSP26640 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC16.48■□□□□ 0.23
VARSP26640 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
VARSP26640 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
VARSP26640 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
VARSP26640 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC16.48■□□□□ 0.23
VARSP26640 WT1-209ENST00000530998 2421 ntTSL 2 BASIC16.48■□□□□ 0.23
VARSP26640 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC16.48■□□□□ 0.23
VARSP26640 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC16.48■□□□□ 0.23
VARSP26640 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC16.48■□□□□ 0.23
VARSP26640 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
VARSP26640 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
VARSP26640 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
VARSP26640 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
VARSP26640 AC006504.4-201ENST00000592118 1568 ntBASIC16.47■□□□□ 0.23
VARSP26640 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC16.47■□□□□ 0.23
VARSP26640 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC16.47■□□□□ 0.23
VARSP26640 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
VARSP26640 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
VARSP26640 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
VARSP26640 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
VARSP26640 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC16.47■□□□□ 0.23
VARSP26640 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
VARSP26640 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC16.47■□□□□ 0.23
VARSP26640 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC16.47■□□□□ 0.23
VARSP26640 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
VARSP26640 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC16.47■□□□□ 0.23
VARSP26640 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
VARSP26640 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
VARSP26640 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC16.47■□□□□ 0.23
VARSP26640 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
VARSP26640 ELK2BP-201ENST00000415014 1224 ntBASIC16.47■□□□□ 0.23
VARSP26640 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC16.47■□□□□ 0.23
VARSP26640 HNRNPDP1-201ENST00000439535 754 ntBASIC16.47■□□□□ 0.23
VARSP26640 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC16.47■□□□□ 0.23
VARSP26640 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
VARSP26640 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
VARSP26640 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC16.47■□□□□ 0.23
VARSP26640 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC16.47■□□□□ 0.23
VARSP26640 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC16.47■□□□□ 0.23
VARSP26640 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC16.47■□□□□ 0.23
VARSP26640 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC16.47■□□□□ 0.23
VARSP26640 AC148477.8-201ENST00000624298 468 ntBASIC16.47■□□□□ 0.23
VARSP26640 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
VARSP26640 AC107918.4-202ENST00000641623 219 ntBASIC16.47■□□□□ 0.23
VARSP26640 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
VARSP26640 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC16.47■□□□□ 0.23
VARSP26640 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
VARSP26640 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
VARSP26640 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
VARSP26640 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
VARSP26640 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC16.47■□□□□ 0.23
VARSP26640 AC092171.3-201ENST00000610122 2651 ntBASIC16.47■□□□□ 0.23
VARSP26640 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC16.47■□□□□ 0.23
VARSP26640 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
VARSP26640 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC16.47■□□□□ 0.23
VARSP26640 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC16.47■□□□□ 0.23
VARSP26640 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
VARSP26640 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
VARSP26640 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
VARSP26640 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
VARSP26640 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
VARSP26640 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC16.46■□□□□ 0.23
VARSP26640 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
VARSP26640 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
VARSP26640 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
VARSP26640 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
VARSP26640 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
VARSP26640 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC16.46■□□□□ 0.23
VARSP26640 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
VARSP26640 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
VARSP26640 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
VARSP26640 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
VARSP26640 MIR940-201ENST00000401276 94 ntBASIC16.46■□□□□ 0.23
VARSP26640 LAGE3P1-201ENST00000425356 484 ntBASIC16.46■□□□□ 0.23
VARSP26640 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
VARSP26640 DNAJB3-201ENST00000446806 729 ntBASIC16.46■□□□□ 0.23
VARSP26640 OR7E14P-202ENST00000530490 1290 ntBASIC16.46■□□□□ 0.23
VARSP26640 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC16.46■□□□□ 0.23
VARSP26640 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC16.46■□□□□ 0.23
VARSP26640 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC16.46■□□□□ 0.23
VARSP26640 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC16.46■□□□□ 0.23
VARSP26640 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC16.46■□□□□ 0.23
VARSP26640 MIR3687-2-201ENST00000577708 61 ntBASIC16.46■□□□□ 0.23
VARSP26640 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC16.46■□□□□ 0.23
VARSP26640 MIR3687-1-201ENST00000614492 61 ntBASIC16.46■□□□□ 0.23
VARSP26640 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC16.46■□□□□ 0.23
VARSP26640 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
VARSP26640 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
VARSP26640 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
VARSP26640 AC026691.1-201ENST00000602502 2017 ntBASIC16.46■□□□□ 0.23
VARSP26640 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
VARSP26640 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
VARSP26640 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
VARSP26640 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 47 ms