Protein–RNA interactions for Protein: P22894

MMP8, Neutrophil collagenase, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP8P22894 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
MMP8P22894 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
MMP8P22894 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
MMP8P22894 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC17.52■□□□□ 0.4
MMP8P22894 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
MMP8P22894 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
MMP8P22894 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC17.52■□□□□ 0.4
MMP8P22894 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
MMP8P22894 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC17.52■□□□□ 0.4
MMP8P22894 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
MMP8P22894 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
MMP8P22894 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
MMP8P22894 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC17.52■□□□□ 0.4
MMP8P22894 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
MMP8P22894 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC17.52■□□□□ 0.4
MMP8P22894 CD99-202ENST00000381180 530 ntTSL 2 BASIC17.52■□□□□ 0.4
MMP8P22894 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC17.52■□□□□ 0.4
MMP8P22894 AC007967.2-201ENST00000432613 625 ntBASIC17.52■□□□□ 0.4
MMP8P22894 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
MMP8P22894 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
MMP8P22894 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC17.52■□□□□ 0.4
MMP8P22894 THTPA-204ENST00000554970 569 ntTSL 4 BASIC17.52■□□□□ 0.4
MMP8P22894 THTPA-206ENST00000556015 535 ntTSL 3 BASIC17.52■□□□□ 0.4
MMP8P22894 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
MMP8P22894 BANP-204ENST00000393208 2283 ntTSL 2 BASIC17.52■□□□□ 0.4
MMP8P22894 AC025580.3-201ENST00000617932 1424 ntBASIC17.52■□□□□ 0.4
MMP8P22894 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC17.52■□□□□ 0.4
MMP8P22894 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
MMP8P22894 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
MMP8P22894 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC17.52■□□□□ 0.39
MMP8P22894 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
MMP8P22894 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
MMP8P22894 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC17.52■□□□□ 0.39
MMP8P22894 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.39
MMP8P22894 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
MMP8P22894 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC17.52■□□□□ 0.39
MMP8P22894 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC17.52■□□□□ 0.39
MMP8P22894 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC17.52■□□□□ 0.39
MMP8P22894 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
MMP8P22894 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
MMP8P22894 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
MMP8P22894 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC17.51■□□□□ 0.39
MMP8P22894 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
MMP8P22894 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC17.51■□□□□ 0.39
MMP8P22894 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC17.51■□□□□ 0.39
MMP8P22894 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
MMP8P22894 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
MMP8P22894 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
MMP8P22894 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC17.51■□□□□ 0.39
MMP8P22894 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
MMP8P22894 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
MMP8P22894 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
MMP8P22894 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC17.51■□□□□ 0.39
MMP8P22894 DPM2-202ENST00000373110 738 ntTSL 2 BASIC17.51■□□□□ 0.39
MMP8P22894 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
MMP8P22894 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC17.51■□□□□ 0.39
MMP8P22894 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
MMP8P22894 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
MMP8P22894 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC17.51■□□□□ 0.39
MMP8P22894 POU5F1P6-201ENST00000466990 990 ntBASIC17.51■□□□□ 0.39
MMP8P22894 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC17.51■□□□□ 0.39
MMP8P22894 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC17.51■□□□□ 0.39
MMP8P22894 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC17.51■□□□□ 0.39
MMP8P22894 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC17.51■□□□□ 0.39
MMP8P22894 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC17.51■□□□□ 0.39
MMP8P22894 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC17.51■□□□□ 0.39
MMP8P22894 AC109635.5-201ENST00000533593 962 ntBASIC17.51■□□□□ 0.39
MMP8P22894 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
MMP8P22894 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC17.51■□□□□ 0.39
MMP8P22894 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
MMP8P22894 AC018845.2-201ENST00000568326 409 ntBASIC17.51■□□□□ 0.39
MMP8P22894 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
MMP8P22894 AC026691.1-201ENST00000602502 2017 ntBASIC17.51■□□□□ 0.39
MMP8P22894 AC004877.2-201ENST00000623941 599 ntBASIC17.51■□□□□ 0.39
MMP8P22894 AC018695.7-201ENST00000624587 2492 ntBASIC17.51■□□□□ 0.39
MMP8P22894 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
MMP8P22894 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
MMP8P22894 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC17.51■□□□□ 0.39
MMP8P22894 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
MMP8P22894 AL391005.1-201ENST00000623953 2435 ntBASIC17.51■□□□□ 0.39
MMP8P22894 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
MMP8P22894 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC17.51■□□□□ 0.39
MMP8P22894 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
MMP8P22894 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC17.51■□□□□ 0.39
MMP8P22894 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
MMP8P22894 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
MMP8P22894 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC17.51■□□□□ 0.39
MMP8P22894 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC17.51■□□□□ 0.39
MMP8P22894 ZNF259P1-201ENST00000407656 1365 ntBASIC17.51■□□□□ 0.39
MMP8P22894 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
MMP8P22894 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
MMP8P22894 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
MMP8P22894 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC17.51■□□□□ 0.39
MMP8P22894 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC17.51■□□□□ 0.39
MMP8P22894 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC17.5■□□□□ 0.39
MMP8P22894 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
MMP8P22894 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC17.5■□□□□ 0.39
MMP8P22894 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
MMP8P22894 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
MMP8P22894 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC17.5■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 47.3 ms