Protein–RNA interactions for Protein: P19876

CXCL3, C-X-C motif chemokine 3, humanhuman

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL3P19876 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
CXCL3P19876 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
CXCL3P19876 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC14.04□□□□□ -0.16
CXCL3P19876 LINC00552-201ENST00000625151 2579 ntBASIC14.04□□□□□ -0.16
CXCL3P19876 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
CXCL3P19876 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CXCL3P19876 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
CXCL3P19876 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CXCL3P19876 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC14.04□□□□□ -0.16
CXCL3P19876 AC015656.1-201ENST00000624209 3578 ntBASIC14.04□□□□□ -0.16
CXCL3P19876 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC14.04□□□□□ -0.16
CXCL3P19876 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
CXCL3P19876 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CXCL3P19876 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC14.04□□□□□ -0.16
CXCL3P19876 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC14.04□□□□□ -0.16
CXCL3P19876 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC14.04□□□□□ -0.16
CXCL3P19876 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC14.04□□□□□ -0.16
CXCL3P19876 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC14.04□□□□□ -0.16
CXCL3P19876 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC14.04□□□□□ -0.16
CXCL3P19876 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CXCL3P19876 AC097488.1-201ENST00000507834 756 ntBASIC14.04□□□□□ -0.16
CXCL3P19876 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CXCL3P19876 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC14.04□□□□□ -0.16
CXCL3P19876 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC14.04□□□□□ -0.16
CXCL3P19876 AL359736.2-201ENST00000621992 437 ntBASIC14.04□□□□□ -0.16
CXCL3P19876 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC14.04□□□□□ -0.16
CXCL3P19876 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC14.04□□□□□ -0.16
CXCL3P19876 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC14.04□□□□□ -0.16
CXCL3P19876 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CXCL3P19876 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CXCL3P19876 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CXCL3P19876 LINC01250-201ENST00000457478 2344 ntTSL 2 BASIC14.04□□□□□ -0.16
CXCL3P19876 ATP6V1H-201ENST00000355221 2365 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CXCL3P19876 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
CXCL3P19876 AL135905.2-201ENST00000584934 1404 ntBASIC14.04□□□□□ -0.16
CXCL3P19876 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CXCL3P19876 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CXCL3P19876 AC007686.3-201ENST00000619017 3487 ntBASIC14.04□□□□□ -0.16
CXCL3P19876 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
CXCL3P19876 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
CXCL3P19876 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CXCL3P19876 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
CXCL3P19876 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
CXCL3P19876 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC14.04□□□□□ -0.16
CXCL3P19876 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC14.04□□□□□ -0.16
CXCL3P19876 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
CXCL3P19876 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
CXCL3P19876 AC097637.2-201ENST00000624096 1997 ntBASIC14.03□□□□□ -0.16
CXCL3P19876 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CXCL3P19876 AP003680.1-201ENST00000598970 3660 ntBASIC14.03□□□□□ -0.16
CXCL3P19876 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC14.03□□□□□ -0.16
CXCL3P19876 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC14.03□□□□□ -0.16
CXCL3P19876 ASF1A-201ENST00000229595 2362 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CXCL3P19876 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC14.03□□□□□ -0.16
CXCL3P19876 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CXCL3P19876 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CXCL3P19876 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
CXCL3P19876 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC14.03□□□□□ -0.16
CXCL3P19876 ATP6V0A4-201ENST00000310018 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CXCL3P19876 AXL-202ENST00000359092 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
CXCL3P19876 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
CXCL3P19876 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CXCL3P19876 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CXCL3P19876 COX5BP2-201ENST00000392354 334 ntBASIC14.03□□□□□ -0.16
CXCL3P19876 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CXCL3P19876 FAM201B-201ENST00000458407 597 ntBASIC14.03□□□□□ -0.16
CXCL3P19876 CNP-204ENST00000472031 1019 ntTSL 2 BASIC14.03□□□□□ -0.16
CXCL3P19876 IGHV3-52-201ENST00000519770 353 ntBASIC14.03□□□□□ -0.16
CXCL3P19876 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CXCL3P19876 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC14.03□□□□□ -0.16
CXCL3P19876 AC109462.3-201ENST00000573934 613 ntBASIC14.03□□□□□ -0.16
CXCL3P19876 CYGB-204ENST00000589342 815 ntTSL 3 BASIC14.03□□□□□ -0.16
CXCL3P19876 SPIB-206ENST00000596074 847 ntTSL 2 BASIC14.03□□□□□ -0.16
CXCL3P19876 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC14.03□□□□□ -0.16
CXCL3P19876 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
CXCL3P19876 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC14.03□□□□□ -0.16
CXCL3P19876 AC010460.3-201ENST00000511359 1579 ntBASIC14.03□□□□□ -0.16
CXCL3P19876 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CXCL3P19876 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC14.03□□□□□ -0.16
CXCL3P19876 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC14.03□□□□□ -0.16
CXCL3P19876 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CXCL3P19876 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
CXCL3P19876 REXO1L8P-201ENST00000604378 1897 ntBASIC14.03□□□□□ -0.16
CXCL3P19876 AC020658.6-201ENST00000623564 1870 ntBASIC14.03□□□□□ -0.16
CXCL3P19876 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CXCL3P19876 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CXCL3P19876 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CXCL3P19876 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
CXCL3P19876 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC14.03□□□□□ -0.16
CXCL3P19876 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
CXCL3P19876 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CXCL3P19876 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CXCL3P19876 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC14.03□□□□□ -0.16
CXCL3P19876 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
CXCL3P19876 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
CXCL3P19876 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
CXCL3P19876 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
CXCL3P19876 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
CXCL3P19876 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
CXCL3P19876 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms