Protein–RNA interactions for Protein: P18074

ERCC2, TFIIH basal transcription factor complex helicase XPD subunit, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2P18074 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC17.16■□□□□ 0.34
ERCC2P18074 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC17.16■□□□□ 0.34
ERCC2P18074 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
ERCC2P18074 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
ERCC2P18074 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
ERCC2P18074 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
ERCC2P18074 MIR940-201ENST00000401276 94 ntBASIC17.16■□□□□ 0.34
ERCC2P18074 HNRNPA1P28-201ENST00000424481 961 ntBASIC17.16■□□□□ 0.34
ERCC2P18074 AP000347.1-202ENST00000435868 847 ntBASIC17.16■□□□□ 0.34
ERCC2P18074 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
ERCC2P18074 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC17.16■□□□□ 0.34
ERCC2P18074 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC17.16■□□□□ 0.34
ERCC2P18074 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC17.16■□□□□ 0.34
ERCC2P18074 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC17.16■□□□□ 0.34
ERCC2P18074 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC17.16■□□□□ 0.34
ERCC2P18074 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC17.16■□□□□ 0.34
ERCC2P18074 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC17.16■□□□□ 0.34
ERCC2P18074 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
ERCC2P18074 AC092865.6-201ENST00000642101 219 ntBASIC17.16■□□□□ 0.34
ERCC2P18074 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
ERCC2P18074 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
ERCC2P18074 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
ERCC2P18074 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
ERCC2P18074 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
ERCC2P18074 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC17.16■□□□□ 0.34
ERCC2P18074 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
ERCC2P18074 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
ERCC2P18074 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
ERCC2P18074 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
ERCC2P18074 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC17.16■□□□□ 0.34
ERCC2P18074 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
ERCC2P18074 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
ERCC2P18074 AC005052.1-201ENST00000625181 2492 ntBASIC17.15■□□□□ 0.34
ERCC2P18074 GPAA1P2-202ENST00000606848 1787 ntBASIC17.15■□□□□ 0.34
ERCC2P18074 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
ERCC2P18074 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
ERCC2P18074 PCDHB19P-201ENST00000570871 2371 ntBASIC17.15■□□□□ 0.34
ERCC2P18074 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
ERCC2P18074 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
ERCC2P18074 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
ERCC2P18074 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
ERCC2P18074 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
ERCC2P18074 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
ERCC2P18074 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
ERCC2P18074 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC17.15■□□□□ 0.34
ERCC2P18074 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC17.15■□□□□ 0.34
ERCC2P18074 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
ERCC2P18074 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
ERCC2P18074 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC17.15■□□□□ 0.34
ERCC2P18074 NMU-203ENST00000507338 658 ntTSL 3 BASIC17.15■□□□□ 0.34
ERCC2P18074 SMN2-210ENST00000511812 867 ntTSL 2 BASIC17.15■□□□□ 0.34
ERCC2P18074 KRT18P58-201ENST00000527480 1120 ntBASIC17.15■□□□□ 0.34
ERCC2P18074 THTPA-204ENST00000554970 569 ntTSL 4 BASIC17.15■□□□□ 0.34
ERCC2P18074 THTPA-206ENST00000556015 535 ntTSL 3 BASIC17.15■□□□□ 0.34
ERCC2P18074 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
ERCC2P18074 MIR3909-201ENST00000579518 119 ntBASIC17.15■□□□□ 0.34
ERCC2P18074 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC17.15■□□□□ 0.34
ERCC2P18074 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC17.15■□□□□ 0.34
ERCC2P18074 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC17.15■□□□□ 0.34
ERCC2P18074 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC17.15■□□□□ 0.34
ERCC2P18074 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
ERCC2P18074 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC17.15■□□□□ 0.34
ERCC2P18074 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
ERCC2P18074 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC17.15■□□□□ 0.34
ERCC2P18074 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
ERCC2P18074 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC17.15■□□□□ 0.34
ERCC2P18074 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
ERCC2P18074 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
ERCC2P18074 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC17.15■□□□□ 0.34
ERCC2P18074 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC17.15■□□□□ 0.34
ERCC2P18074 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC17.15■□□□□ 0.34
ERCC2P18074 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
ERCC2P18074 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
ERCC2P18074 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
ERCC2P18074 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC17.15■□□□□ 0.34
ERCC2P18074 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC17.14■□□□□ 0.34
ERCC2P18074 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
ERCC2P18074 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.34
ERCC2P18074 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC17.14■□□□□ 0.34
ERCC2P18074 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
ERCC2P18074 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
ERCC2P18074 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
ERCC2P18074 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
ERCC2P18074 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
ERCC2P18074 AL662844.4-201ENST00000606367 2838 ntBASIC17.14■□□□□ 0.33
ERCC2P18074 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
ERCC2P18074 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
ERCC2P18074 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
ERCC2P18074 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
ERCC2P18074 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC17.14■□□□□ 0.33
ERCC2P18074 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
ERCC2P18074 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
ERCC2P18074 PMS2P4-201ENST00000412466 1052 ntBASIC17.14■□□□□ 0.33
ERCC2P18074 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC17.14■□□□□ 0.33
ERCC2P18074 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC17.14■□□□□ 0.33
ERCC2P18074 POLD2P1-201ENST00000511220 997 ntBASIC17.14■□□□□ 0.33
ERCC2P18074 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC17.14■□□□□ 0.33
ERCC2P18074 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
ERCC2P18074 PDPK2P-202ENST00000562415 1191 ntBASIC17.14■□□□□ 0.33
ERCC2P18074 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC17.14■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms