Protein–RNA interactions for Protein: P13942

COL11A2, Collagen alpha-2(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,736 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A2P13942 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC20.03■□□□□ 0.8
COL11A2P13942 AMT-232ENST00000636199 1546 ntTSL 5 BASIC20.03■□□□□ 0.8
COL11A2P13942 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
COL11A2P13942 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC20.03■□□□□ 0.8
COL11A2P13942 SLC35A1-202ENST00000369556 1720 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
COL11A2P13942 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC20.03■□□□□ 0.8
COL11A2P13942 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
COL11A2P13942 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
COL11A2P13942 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
COL11A2P13942 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
COL11A2P13942 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
COL11A2P13942 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
COL11A2P13942 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
COL11A2P13942 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC20.03■□□□□ 0.8
COL11A2P13942 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC20.03■□□□□ 0.8
COL11A2P13942 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
COL11A2P13942 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC20.03■□□□□ 0.8
COL11A2P13942 ZNF767P-206ENST00000513792 565 ntBASIC20.03■□□□□ 0.8
COL11A2P13942 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
COL11A2P13942 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC20.03■□□□□ 0.8
COL11A2P13942 BRI3BPP1-201ENST00000594224 787 ntBASIC20.03■□□□□ 0.8
COL11A2P13942 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
COL11A2P13942 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC20.03■□□□□ 0.8
COL11A2P13942 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
COL11A2P13942 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
COL11A2P13942 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC20.03■□□□□ 0.8
COL11A2P13942 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
COL11A2P13942 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
COL11A2P13942 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
COL11A2P13942 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
COL11A2P13942 Z97205.2-201ENST00000564697 1639 ntBASIC20.03■□□□□ 0.8
COL11A2P13942 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
COL11A2P13942 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
COL11A2P13942 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
COL11A2P13942 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC20.02■□□□□ 0.8
COL11A2P13942 NSL1-201ENST00000366976 722 ntTSL 2 BASIC20.02■□□□□ 0.8
COL11A2P13942 UBE2T-201ENST00000367274 922 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
COL11A2P13942 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
COL11A2P13942 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC20.02■□□□□ 0.8
COL11A2P13942 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC20.02■□□□□ 0.8
COL11A2P13942 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC20.02■□□□□ 0.8
COL11A2P13942 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC20.02■□□□□ 0.8
COL11A2P13942 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC20.02■□□□□ 0.8
COL11A2P13942 IGHV3OR16-16-201ENST00000563644 343 ntBASIC20.02■□□□□ 0.8
COL11A2P13942 AC036164.1-201ENST00000570544 333 ntBASIC20.02■□□□□ 0.8
COL11A2P13942 AC124283.3-201ENST00000570869 594 ntBASIC20.02■□□□□ 0.8
COL11A2P13942 AC084346.2-201ENST00000607097 949 ntBASIC20.02■□□□□ 0.8
COL11A2P13942 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
COL11A2P13942 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC20.02■□□□□ 0.8
COL11A2P13942 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC20.02■□□□□ 0.8
COL11A2P13942 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC20.02■□□□□ 0.8
COL11A2P13942 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
COL11A2P13942 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC20.02■□□□□ 0.8
COL11A2P13942 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
COL11A2P13942 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
COL11A2P13942 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
COL11A2P13942 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC20.02■□□□□ 0.8
COL11A2P13942 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
COL11A2P13942 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
COL11A2P13942 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.79
COL11A2P13942 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
COL11A2P13942 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.79
COL11A2P13942 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.79
COL11A2P13942 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC20.02■□□□□ 0.79
COL11A2P13942 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.79
COL11A2P13942 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC20.02■□□□□ 0.79
COL11A2P13942 OSGIN2-203ENST00000520659 801 ntTSL 2 BASIC20.02■□□□□ 0.79
COL11A2P13942 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC20.02■□□□□ 0.79
COL11A2P13942 AC123786.1-201ENST00000581626 661 ntTSL 3 BASIC20.02■□□□□ 0.79
COL11A2P13942 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC20.02■□□□□ 0.79
COL11A2P13942 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC20.02■□□□□ 0.79
COL11A2P13942 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
COL11A2P13942 TUBB1P2-201ENST00000422712 1306 ntBASIC20.01■□□□□ 0.79
COL11A2P13942 TUBB1P1-201ENST00000503144 1300 ntBASIC20.01■□□□□ 0.79
COL11A2P13942 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
COL11A2P13942 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
COL11A2P13942 PLSCR4-204ENST00000446574 1442 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
COL11A2P13942 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC20.01■□□□□ 0.79
COL11A2P13942 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
COL11A2P13942 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
COL11A2P13942 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
COL11A2P13942 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
COL11A2P13942 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
COL11A2P13942 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC20.01■□□□□ 0.79
COL11A2P13942 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC20.01■□□□□ 0.79
COL11A2P13942 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC20.01■□□□□ 0.79
COL11A2P13942 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
COL11A2P13942 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC20.01■□□□□ 0.79
COL11A2P13942 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
COL11A2P13942 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
COL11A2P13942 STX1A-203ENST00000395155 783 ntTSL 2 BASIC20.01■□□□□ 0.79
COL11A2P13942 AL442647.2-201ENST00000429864 857 ntBASIC20.01■□□□□ 0.79
COL11A2P13942 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC20.01■□□□□ 0.79
COL11A2P13942 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC20.01■□□□□ 0.79
COL11A2P13942 AL583810.1-201ENST00000553344 1045 ntBASIC20.01■□□□□ 0.79
COL11A2P13942 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC20.01■□□□□ 0.79
COL11A2P13942 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC20.01■□□□□ 0.79
COL11A2P13942 CR381653.1-201ENST00000622961 812 ntTSL 3 BASIC20.01■□□□□ 0.79
COL11A2P13942 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
COL11A2P13942 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 57.4 ms