Protein–RNA interactions for Protein: P09326

CD48, CD48 antigen, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD48P09326 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC17.3■□□□□ 0.36
CD48P09326 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC17.3■□□□□ 0.36
CD48P09326 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CD48P09326 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CD48P09326 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
CD48P09326 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC17.3■□□□□ 0.36
CD48P09326 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CD48P09326 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CD48P09326 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CD48P09326 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC17.3■□□□□ 0.36
CD48P09326 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CD48P09326 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC17.3■□□□□ 0.36
CD48P09326 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC17.3■□□□□ 0.36
CD48P09326 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC17.3■□□□□ 0.36
CD48P09326 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
CD48P09326 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
CD48P09326 SLC9A3P2-201ENST00000447821 2021 ntBASIC17.3■□□□□ 0.36
CD48P09326 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CD48P09326 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC17.3■□□□□ 0.36
CD48P09326 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
CD48P09326 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CD48P09326 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CD48P09326 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CD48P09326 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CD48P09326 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CD48P09326 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
CD48P09326 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC17.29■□□□□ 0.36
CD48P09326 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CD48P09326 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CD48P09326 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CD48P09326 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC17.29■□□□□ 0.36
CD48P09326 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
CD48P09326 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CD48P09326 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CD48P09326 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
CD48P09326 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CD48P09326 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC17.29■□□□□ 0.36
CD48P09326 CDK2AP2P3-201ENST00000422476 372 ntBASIC17.29■□□□□ 0.36
CD48P09326 AC093909.1-201ENST00000504731 1122 ntBASIC17.29■□□□□ 0.36
CD48P09326 PENK-208ENST00000523051 772 ntTSL 5 BASIC17.29■□□□□ 0.36
CD48P09326 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC17.29■□□□□ 0.36
CD48P09326 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC17.29■□□□□ 0.36
CD48P09326 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC17.29■□□□□ 0.36
CD48P09326 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC17.29■□□□□ 0.36
CD48P09326 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC17.29■□□□□ 0.36
CD48P09326 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC17.29■□□□□ 0.36
CD48P09326 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC17.29■□□□□ 0.36
CD48P09326 AC012569.1-201ENST00000591191 1524 ntBASIC17.29■□□□□ 0.36
CD48P09326 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CD48P09326 GPAA1P2-202ENST00000606848 1787 ntBASIC17.29■□□□□ 0.36
CD48P09326 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CD48P09326 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
CD48P09326 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CD48P09326 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC17.29■□□□□ 0.36
CD48P09326 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC17.29■□□□□ 0.36
CD48P09326 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC17.29■□□□□ 0.36
CD48P09326 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CD48P09326 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC17.29■□□□□ 0.36
CD48P09326 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
CD48P09326 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC17.29■□□□□ 0.36
CD48P09326 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
CD48P09326 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
CD48P09326 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC17.29■□□□□ 0.36
CD48P09326 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
CD48P09326 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CD48P09326 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CD48P09326 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC17.28■□□□□ 0.36
CD48P09326 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CD48P09326 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
CD48P09326 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CD48P09326 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC17.28■□□□□ 0.36
CD48P09326 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC17.28■□□□□ 0.36
CD48P09326 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CD48P09326 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CD48P09326 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CD48P09326 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.28■□□□□ 0.36
CD48P09326 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
CD48P09326 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
CD48P09326 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CD48P09326 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
CD48P09326 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC17.28■□□□□ 0.36
CD48P09326 HCG4B-203ENST00000450128 991 ntBASIC17.28■□□□□ 0.36
CD48P09326 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC17.28■□□□□ 0.36
CD48P09326 CD63-204ENST00000546939 779 ntTSL 3 BASIC17.28■□□□□ 0.36
CD48P09326 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CD48P09326 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CD48P09326 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC17.28■□□□□ 0.36
CD48P09326 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CD48P09326 AP001350.2-201ENST00000625104 1094 ntBASIC17.28■□□□□ 0.36
CD48P09326 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC17.28■□□□□ 0.36
CD48P09326 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC17.28■□□□□ 0.36
CD48P09326 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC17.28■□□□□ 0.36
CD48P09326 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC17.28■□□□□ 0.36
CD48P09326 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC17.28■□□□□ 0.36
CD48P09326 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CD48P09326 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CD48P09326 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
CD48P09326 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CD48P09326 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CD48P09326 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 58.8 ms