Protein–RNA interactions for Protein: P09110

ACAA1, 3-ketoacyl-CoA thiolase, peroxisomal, humanhuman

Predicted RBP Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACAA1P09110 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
ACAA1P09110 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
ACAA1P09110 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
ACAA1P09110 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
ACAA1P09110 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
ACAA1P09110 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
ACAA1P09110 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
ACAA1P09110 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
ACAA1P09110 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
ACAA1P09110 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
ACAA1P09110 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
ACAA1P09110 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
ACAA1P09110 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC14.37□□□□□ -0.11
ACAA1P09110 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
ACAA1P09110 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
ACAA1P09110 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
ACAA1P09110 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
ACAA1P09110 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC14.37□□□□□ -0.11
ACAA1P09110 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
ACAA1P09110 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
ACAA1P09110 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
ACAA1P09110 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC14.37□□□□□ -0.11
ACAA1P09110 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC14.37□□□□□ -0.11
ACAA1P09110 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
ACAA1P09110 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC14.37□□□□□ -0.11
ACAA1P09110 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
ACAA1P09110 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
ACAA1P09110 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
ACAA1P09110 RPS2P28-201ENST00000314255 741 ntBASIC14.37□□□□□ -0.11
ACAA1P09110 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
ACAA1P09110 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC14.37□□□□□ -0.11
ACAA1P09110 MED22-202ENST00000371999 987 ntTSL 3 BASIC14.37□□□□□ -0.11
ACAA1P09110 KRT18P67-201ENST00000432816 1264 ntBASIC14.37□□□□□ -0.11
ACAA1P09110 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC14.37□□□□□ -0.11
ACAA1P09110 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC14.37□□□□□ -0.11
ACAA1P09110 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC14.37□□□□□ -0.11
ACAA1P09110 OR7E14P-202ENST00000530490 1290 ntBASIC14.37□□□□□ -0.11
ACAA1P09110 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC14.37□□□□□ -0.11
ACAA1P09110 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC14.37□□□□□ -0.11
ACAA1P09110 SDCCAG3P1-201ENST00000589292 1150 ntBASIC14.37□□□□□ -0.11
ACAA1P09110 AL805961.1-202ENST00000641562 540 ntBASIC14.37□□□□□ -0.11
ACAA1P09110 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
ACAA1P09110 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC14.37□□□□□ -0.11
ACAA1P09110 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
ACAA1P09110 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
ACAA1P09110 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
ACAA1P09110 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
ACAA1P09110 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC14.37□□□□□ -0.11
ACAA1P09110 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC14.37□□□□□ -0.11
ACAA1P09110 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC14.37□□□□□ -0.11
ACAA1P09110 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
ACAA1P09110 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC14.37□□□□□ -0.11
ACAA1P09110 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC14.37□□□□□ -0.11
ACAA1P09110 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC14.37□□□□□ -0.11
ACAA1P09110 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
ACAA1P09110 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
ACAA1P09110 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
ACAA1P09110 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
ACAA1P09110 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC14.36□□□□□ -0.11
ACAA1P09110 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC14.36□□□□□ -0.11
ACAA1P09110 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
ACAA1P09110 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
ACAA1P09110 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC14.36□□□□□ -0.11
ACAA1P09110 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
ACAA1P09110 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
ACAA1P09110 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC14.36□□□□□ -0.11
ACAA1P09110 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
ACAA1P09110 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
ACAA1P09110 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
ACAA1P09110 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC14.36□□□□□ -0.11
ACAA1P09110 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
ACAA1P09110 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC14.36□□□□□ -0.11
ACAA1P09110 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
ACAA1P09110 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC14.36□□□□□ -0.11
ACAA1P09110 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
ACAA1P09110 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
ACAA1P09110 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC14.36□□□□□ -0.11
ACAA1P09110 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
ACAA1P09110 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC14.36□□□□□ -0.11
ACAA1P09110 RPS2P1-201ENST00000434010 821 ntBASIC14.36□□□□□ -0.11
ACAA1P09110 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
ACAA1P09110 AP002469.2-201ENST00000531724 424 ntBASIC14.36□□□□□ -0.11
ACAA1P09110 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC14.36□□□□□ -0.11
ACAA1P09110 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC14.36□□□□□ -0.11
ACAA1P09110 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC14.36□□□□□ -0.11
ACAA1P09110 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
ACAA1P09110 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
ACAA1P09110 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
ACAA1P09110 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
ACAA1P09110 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
ACAA1P09110 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC14.36□□□□□ -0.11
ACAA1P09110 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
ACAA1P09110 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
ACAA1P09110 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
ACAA1P09110 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
ACAA1P09110 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
ACAA1P09110 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
ACAA1P09110 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
ACAA1P09110 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC14.35□□□□□ -0.11
ACAA1P09110 TOP3BP1-201ENST00000420768 1380 ntBASIC14.35□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 94.7 ms