Protein–RNA interactions for Protein: P07384

CAPN1, Calpain-1 catalytic subunit, humanhuman

Predictions only

Length 714 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1P07384 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC16.49■□□□□ 0.23
CAPN1P07384 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CAPN1P07384 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC16.49■□□□□ 0.23
CAPN1P07384 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
CAPN1P07384 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC16.49■□□□□ 0.23
CAPN1P07384 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CAPN1P07384 DUX4L17-201ENST00000557360 1267 ntBASIC16.49■□□□□ 0.23
CAPN1P07384 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC16.49■□□□□ 0.23
CAPN1P07384 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC16.49■□□□□ 0.23
CAPN1P07384 AL139424.1-201ENST00000607572 797 ntBASIC16.49■□□□□ 0.23
CAPN1P07384 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC16.49■□□□□ 0.23
CAPN1P07384 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CAPN1P07384 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CAPN1P07384 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC16.49■□□□□ 0.23
CAPN1P07384 GID4-202ENST00000376345 1391 ntTSL 3 BASIC16.49■□□□□ 0.23
CAPN1P07384 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CAPN1P07384 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CAPN1P07384 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
CAPN1P07384 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC16.49■□□□□ 0.23
CAPN1P07384 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CAPN1P07384 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC16.49■□□□□ 0.23
CAPN1P07384 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CAPN1P07384 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CAPN1P07384 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CAPN1P07384 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC16.48■□□□□ 0.23
CAPN1P07384 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CAPN1P07384 AL391256.1-201ENST00000443260 1855 ntBASIC16.48■□□□□ 0.23
CAPN1P07384 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CAPN1P07384 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC16.48■□□□□ 0.23
CAPN1P07384 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CAPN1P07384 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CAPN1P07384 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CAPN1P07384 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
CAPN1P07384 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CAPN1P07384 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CAPN1P07384 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC16.48■□□□□ 0.23
CAPN1P07384 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
CAPN1P07384 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC16.48■□□□□ 0.23
CAPN1P07384 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC16.48■□□□□ 0.23
CAPN1P07384 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC16.48■□□□□ 0.23
CAPN1P07384 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC16.48■□□□□ 0.23
CAPN1P07384 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
CAPN1P07384 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CAPN1P07384 PGM5P2-202ENST00000637225 1043 ntBASIC16.48■□□□□ 0.23
CAPN1P07384 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
CAPN1P07384 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC16.48■□□□□ 0.23
CAPN1P07384 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC16.48■□□□□ 0.23
CAPN1P07384 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
CAPN1P07384 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC16.48■□□□□ 0.23
CAPN1P07384 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CAPN1P07384 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CAPN1P07384 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
CAPN1P07384 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
CAPN1P07384 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC16.48■□□□□ 0.23
CAPN1P07384 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC16.48■□□□□ 0.23
CAPN1P07384 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CAPN1P07384 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
CAPN1P07384 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
CAPN1P07384 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CAPN1P07384 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC16.48■□□□□ 0.23
CAPN1P07384 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
CAPN1P07384 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC16.47■□□□□ 0.23
CAPN1P07384 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CAPN1P07384 AC006504.4-201ENST00000592118 1568 ntBASIC16.47■□□□□ 0.23
CAPN1P07384 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CAPN1P07384 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CAPN1P07384 MST1L-201ENST00000442552 2185 ntBASIC16.47■□□□□ 0.23
CAPN1P07384 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC16.47■□□□□ 0.23
CAPN1P07384 DOC2GP-204ENST00000639052 2548 ntBASIC16.47■□□□□ 0.23
CAPN1P07384 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
CAPN1P07384 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CAPN1P07384 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
CAPN1P07384 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
CAPN1P07384 AP002414.1-201ENST00000391405 1147 ntBASIC16.47■□□□□ 0.23
CAPN1P07384 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
CAPN1P07384 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC16.47■□□□□ 0.23
CAPN1P07384 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC16.47■□□□□ 0.23
CAPN1P07384 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC16.47■□□□□ 0.23
CAPN1P07384 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC16.47■□□□□ 0.23
CAPN1P07384 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
CAPN1P07384 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC16.47■□□□□ 0.23
CAPN1P07384 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CAPN1P07384 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
CAPN1P07384 MIR1199-201ENST00000621445 119 ntBASIC16.47■□□□□ 0.23
CAPN1P07384 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC16.47■□□□□ 0.23
CAPN1P07384 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CAPN1P07384 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
CAPN1P07384 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
CAPN1P07384 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CAPN1P07384 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CAPN1P07384 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CAPN1P07384 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
CAPN1P07384 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CAPN1P07384 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CAPN1P07384 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC16.47■□□□□ 0.23
CAPN1P07384 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
CAPN1P07384 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CAPN1P07384 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CAPN1P07384 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC16.47■□□□□ 0.23
CAPN1P07384 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC16.47■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 191.3 ms