Protein–RNA interactions for Protein: P04628

WNT1, Proto-oncogene Wnt-1, humanhuman

Predictions only

Length 370 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
WNT1P04628 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC16.3■□□□□ 0.2
WNT1P04628 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC16.3■□□□□ 0.2
WNT1P04628 GAPDHP21-201ENST00000450301 1010 ntBASIC16.3■□□□□ 0.2
WNT1P04628 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
WNT1P04628 PUDP-206ENST00000540122 825 ntTSL 2 BASIC16.3■□□□□ 0.2
WNT1P04628 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
WNT1P04628 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC16.3■□□□□ 0.2
WNT1P04628 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC16.3■□□□□ 0.2
WNT1P04628 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
WNT1P04628 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
WNT1P04628 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC16.3■□□□□ 0.2
WNT1P04628 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
WNT1P04628 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
WNT1P04628 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
WNT1P04628 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC16.3■□□□□ 0.2
WNT1P04628 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
WNT1P04628 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
WNT1P04628 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
WNT1P04628 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
WNT1P04628 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
WNT1P04628 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC16.3■□□□□ 0.2
WNT1P04628 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
WNT1P04628 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
WNT1P04628 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
WNT1P04628 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
WNT1P04628 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC16.29■□□□□ 0.2
WNT1P04628 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC16.29■□□□□ 0.2
WNT1P04628 GOLGA2P9-201ENST00000596977 1937 ntBASIC16.29■□□□□ 0.2
WNT1P04628 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
WNT1P04628 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC16.29■□□□□ 0.2
WNT1P04628 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
WNT1P04628 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
WNT1P04628 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC16.29■□□□□ 0.2
WNT1P04628 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
WNT1P04628 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
WNT1P04628 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
WNT1P04628 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
WNT1P04628 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
WNT1P04628 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC16.29■□□□□ 0.2
WNT1P04628 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
WNT1P04628 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
WNT1P04628 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
WNT1P04628 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC16.29■□□□□ 0.2
WNT1P04628 BANF1P1-201ENST00000553684 263 ntBASIC16.29■□□□□ 0.2
WNT1P04628 SPDYE22P-201ENST00000582158 798 ntBASIC16.29■□□□□ 0.2
WNT1P04628 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
WNT1P04628 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC16.29■□□□□ 0.2
WNT1P04628 AC009118.2-201ENST00000613275 655 ntBASIC16.29■□□□□ 0.2
WNT1P04628 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
WNT1P04628 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
WNT1P04628 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC16.29■□□□□ 0.2
WNT1P04628 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
WNT1P04628 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC16.29■□□□□ 0.2
WNT1P04628 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC16.29■□□□□ 0.2
WNT1P04628 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
WNT1P04628 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC16.29■□□□□ 0.2
WNT1P04628 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC16.29■□□□□ 0.2
WNT1P04628 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
WNT1P04628 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC16.29■□□□□ 0.2
WNT1P04628 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
WNT1P04628 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC16.29■□□□□ 0.2
WNT1P04628 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
WNT1P04628 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC16.29■□□□□ 0.2
WNT1P04628 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
WNT1P04628 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
WNT1P04628 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
WNT1P04628 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC16.28■□□□□ 0.2
WNT1P04628 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
WNT1P04628 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
WNT1P04628 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
WNT1P04628 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
WNT1P04628 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
WNT1P04628 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
WNT1P04628 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC16.28■□□□□ 0.2
WNT1P04628 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
WNT1P04628 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
WNT1P04628 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
WNT1P04628 PIN1P1-201ENST00000412108 996 ntBASIC16.28■□□□□ 0.2
WNT1P04628 SPTLC1P1-201ENST00000447199 261 ntBASIC16.28■□□□□ 0.2
WNT1P04628 AC009477.1-201ENST00000452936 217 ntBASIC16.28■□□□□ 0.2
WNT1P04628 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
WNT1P04628 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC16.28■□□□□ 0.2
WNT1P04628 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
WNT1P04628 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC16.28■□□□□ 0.2
WNT1P04628 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
WNT1P04628 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC16.28■□□□□ 0.2
WNT1P04628 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC16.28■□□□□ 0.2
WNT1P04628 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC16.28■□□□□ 0.2
WNT1P04628 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC16.28■□□□□ 0.2
WNT1P04628 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC16.28■□□□□ 0.2
WNT1P04628 TEX28P1-201ENST00000613479 1221 ntBASIC16.28■□□□□ 0.2
WNT1P04628 AL662799.1-202ENST00000614205 422 ntBASIC16.28■□□□□ 0.2
WNT1P04628 TEX28P2-201ENST00000617764 1221 ntBASIC16.28■□□□□ 0.2
WNT1P04628 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
WNT1P04628 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC16.28■□□□□ 0.2
WNT1P04628 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
WNT1P04628 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
WNT1P04628 PCDHB17P-201ENST00000539533 2393 ntBASIC16.28■□□□□ 0.2
WNT1P04628 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
WNT1P04628 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 53.6 ms