Protein–RNA interactions for Protein: P04436

T-cell receptor alpha chain V region HPB-MLT (Fragment), humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04436 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
P04436 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
P04436 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC15.23■□□□□ 0.03
P04436 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
P04436 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC15.23■□□□□ 0.03
P04436 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
P04436 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
P04436 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC15.23■□□□□ 0.03
P04436 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
P04436 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC15.23■□□□□ 0.03
P04436 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC15.23■□□□□ 0.03
P04436 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
P04436 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
P04436 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC15.23■□□□□ 0.03
P04436 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC15.23■□□□□ 0.03
P04436 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
P04436 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
P04436 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
P04436 AL627223.1-201ENST00000416693 442 ntBASIC15.23■□□□□ 0.03
P04436 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC15.23■□□□□ 0.03
P04436 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC15.23■□□□□ 0.03
P04436 RNF34-208ENST00000555076 593 ntTSL 3 BASIC15.23■□□□□ 0.03
P04436 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC15.23■□□□□ 0.03
P04436 RPS15-207ENST00000591032 550 ntTSL 3 BASIC15.23■□□□□ 0.03
P04436 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
P04436 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
P04436 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
P04436 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC15.23■□□□□ 0.03
P04436 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
P04436 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
P04436 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
P04436 KRT8P39-201ENST00000396270 1433 ntBASIC15.23■□□□□ 0.03
P04436 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
P04436 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
P04436 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
P04436 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
P04436 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
P04436 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
P04436 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
P04436 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
P04436 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
P04436 GOLGA6L17P-202ENST00000614358 1398 ntBASIC15.23■□□□□ 0.03
P04436 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC15.23■□□□□ 0.03
P04436 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC15.23■□□□□ 0.03
P04436 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
P04436 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
P04436 UXT-AS1-201ENST00000590504 1525 ntBASIC15.22■□□□□ 0.03
P04436 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
P04436 AP001094.4-201ENST00000579008 2176 ntBASIC15.22■□□□□ 0.03
P04436 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
P04436 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
P04436 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
P04436 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
P04436 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
P04436 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
P04436 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
P04436 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC15.22■□□□□ 0.03
P04436 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
P04436 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
P04436 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
P04436 KRT18P32-201ENST00000424695 1287 ntBASIC15.22■□□□□ 0.03
P04436 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC15.22■□□□□ 0.03
P04436 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
P04436 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC15.22■□□□□ 0.03
P04436 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC15.22■□□□□ 0.03
P04436 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
P04436 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC15.22■□□□□ 0.03
P04436 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
P04436 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC15.22■□□□□ 0.03
P04436 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
P04436 DAD1-205ENST00000543337 501 ntTSL 3 BASIC15.22■□□□□ 0.03
P04436 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
P04436 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC15.22■□□□□ 0.03
P04436 KRT8P23-201ENST00000560090 1207 ntBASIC15.22■□□□□ 0.03
P04436 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
P04436 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC15.22■□□□□ 0.03
P04436 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
P04436 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
P04436 RPS15-212ENST00000593052 629 ntTSL 2 BASIC15.22■□□□□ 0.03
P04436 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC15.22■□□□□ 0.03
P04436 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
P04436 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
P04436 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
P04436 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC15.22■□□□□ 0.03
P04436 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC15.22■□□□□ 0.03
P04436 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
P04436 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
P04436 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
P04436 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC15.22■□□□□ 0.03
P04436 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC15.22■□□□□ 0.03
P04436 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
P04436 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
P04436 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
P04436 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
P04436 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
P04436 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC15.21■□□□□ 0.03
P04436 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
P04436 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.03
P04436 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC15.21■□□□□ 0.03
P04436 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms