Protein–RNA interactions for Protein: O95407

TNFRSF6B, Tumor necrosis factor receptor superfamily member 6B, humanhuman

Predictions only

Length 300 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF6BO95407 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
TNFRSF6BO95407 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
TNFRSF6BO95407 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
TNFRSF6BO95407 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
TNFRSF6BO95407 AC002310.6-201ENST00000624451 1377 ntBASIC12.18□□□□□ -0.46
TNFRSF6BO95407 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
TNFRSF6BO95407 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
TNFRSF6BO95407 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
TNFRSF6BO95407 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
TNFRSF6BO95407 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
TNFRSF6BO95407 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC12.18□□□□□ -0.46
TNFRSF6BO95407 SSTR2-201ENST00000357585 7683 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
TNFRSF6BO95407 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
TNFRSF6BO95407 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC12.18□□□□□ -0.46
TNFRSF6BO95407 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC12.18□□□□□ -0.46
TNFRSF6BO95407 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC12.18□□□□□ -0.46
TNFRSF6BO95407 GGT4P-201ENST00000623672 1708 ntBASIC12.18□□□□□ -0.46
TNFRSF6BO95407 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
TNFRSF6BO95407 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
TNFRSF6BO95407 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC12.18□□□□□ -0.46
TNFRSF6BO95407 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
TNFRSF6BO95407 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
TNFRSF6BO95407 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
TNFRSF6BO95407 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
TNFRSF6BO95407 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC12.18□□□□□ -0.46
TNFRSF6BO95407 MIR935-201ENST00000401179 91 ntBASIC12.18□□□□□ -0.46
TNFRSF6BO95407 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC12.18□□□□□ -0.46
TNFRSF6BO95407 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
TNFRSF6BO95407 RASA4DP-201ENST00000460726 1199 ntBASIC12.18□□□□□ -0.46
TNFRSF6BO95407 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
TNFRSF6BO95407 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
TNFRSF6BO95407 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
TNFRSF6BO95407 CD81-212ENST00000526072 1172 ntTSL 5 BASIC12.18□□□□□ -0.46
TNFRSF6BO95407 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC12.18□□□□□ -0.46
TNFRSF6BO95407 GCSHP2-201ENST00000560971 527 ntBASIC12.18□□□□□ -0.46
TNFRSF6BO95407 NAA38-203ENST00000575071 553 ntTSL 2 BASIC12.18□□□□□ -0.46
TNFRSF6BO95407 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC12.18□□□□□ -0.46
TNFRSF6BO95407 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
TNFRSF6BO95407 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC12.18□□□□□ -0.46
TNFRSF6BO95407 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
TNFRSF6BO95407 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
TNFRSF6BO95407 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC12.18□□□□□ -0.46
TNFRSF6BO95407 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
TNFRSF6BO95407 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
TNFRSF6BO95407 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
TNFRSF6BO95407 BCL9L-201ENST00000334801 10005 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
TNFRSF6BO95407 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
TNFRSF6BO95407 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC12.18□□□□□ -0.46
TNFRSF6BO95407 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
TNFRSF6BO95407 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC12.18□□□□□ -0.46
TNFRSF6BO95407 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC12.18□□□□□ -0.46
TNFRSF6BO95407 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
TNFRSF6BO95407 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
TNFRSF6BO95407 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
TNFRSF6BO95407 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC12.18□□□□□ -0.46
TNFRSF6BO95407 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
TNFRSF6BO95407 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC12.18□□□□□ -0.46
TNFRSF6BO95407 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC12.18□□□□□ -0.46
TNFRSF6BO95407 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
TNFRSF6BO95407 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
TNFRSF6BO95407 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
TNFRSF6BO95407 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC12.18□□□□□ -0.46
TNFRSF6BO95407 ASF1A-201ENST00000229595 2362 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
TNFRSF6BO95407 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC12.18□□□□□ -0.46
TNFRSF6BO95407 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
TNFRSF6BO95407 FYTTD1-201ENST00000241502 6866 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
TNFRSF6BO95407 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
TNFRSF6BO95407 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
TNFRSF6BO95407 AL021920.2-201ENST00000624828 1351 ntBASIC12.18□□□□□ -0.46
TNFRSF6BO95407 IL17RA-204ENST00000612619 8506 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
TNFRSF6BO95407 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
TNFRSF6BO95407 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC12.17□□□□□ -0.46
TNFRSF6BO95407 HIPK3-201ENST00000303296 7408 ntTSL 5 BASIC12.17□□□□□ -0.46
TNFRSF6BO95407 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
TNFRSF6BO95407 AC006449.6-201ENST00000612330 2296 ntBASIC12.17□□□□□ -0.46
TNFRSF6BO95407 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC12.17□□□□□ -0.46
TNFRSF6BO95407 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
TNFRSF6BO95407 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC12.17□□□□□ -0.46
TNFRSF6BO95407 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC12.17□□□□□ -0.46
TNFRSF6BO95407 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC12.17□□□□□ -0.46
TNFRSF6BO95407 AC013268.4-201ENST00000637413 2228 ntBASIC12.17□□□□□ -0.46
TNFRSF6BO95407 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
TNFRSF6BO95407 PEX7-202ENST00000367756 680 ntTSL 3 BASIC12.17□□□□□ -0.46
TNFRSF6BO95407 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC12.17□□□□□ -0.46
TNFRSF6BO95407 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
TNFRSF6BO95407 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
TNFRSF6BO95407 HMGA1P5-201ENST00000412453 271 ntBASIC12.17□□□□□ -0.46
TNFRSF6BO95407 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC12.17□□□□□ -0.46
TNFRSF6BO95407 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC12.17□□□□□ -0.46
TNFRSF6BO95407 AC122714.2-201ENST00000502787 707 ntBASIC12.17□□□□□ -0.46
TNFRSF6BO95407 STK19B-204ENST00000512515 211 ntBASIC12.17□□□□□ -0.46
TNFRSF6BO95407 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC12.17□□□□□ -0.46
TNFRSF6BO95407 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
TNFRSF6BO95407 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC12.17□□□□□ -0.46
TNFRSF6BO95407 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
TNFRSF6BO95407 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC12.17□□□□□ -0.46
TNFRSF6BO95407 AC092666.2-201ENST00000613287 246 ntBASIC12.17□□□□□ -0.46
TNFRSF6BO95407 LITAF-220ENST00000620789 692 ntTSL 5 BASIC12.17□□□□□ -0.46
TNFRSF6BO95407 PPM1A-203ENST00000395076 8184 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
TNFRSF6BO95407 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 84.8 ms