Protein–RNA interactions for Protein: O75346

ZNF253, Zinc finger protein 253, humanhuman

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF253O75346 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
ZNF253O75346 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC13.08□□□□□ -0.32
ZNF253O75346 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
ZNF253O75346 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC13.08□□□□□ -0.32
ZNF253O75346 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC13.08□□□□□ -0.32
ZNF253O75346 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
ZNF253O75346 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
ZNF253O75346 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
ZNF253O75346 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
ZNF253O75346 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
ZNF253O75346 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
ZNF253O75346 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
ZNF253O75346 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
ZNF253O75346 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
ZNF253O75346 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
ZNF253O75346 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC13.08□□□□□ -0.32
ZNF253O75346 CTNS-203ENST00000399306 803 ntTSL 3 BASIC13.08□□□□□ -0.32
ZNF253O75346 AL645929.1-201ENST00000420084 975 ntBASIC13.08□□□□□ -0.32
ZNF253O75346 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC13.08□□□□□ -0.32
ZNF253O75346 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC13.08□□□□□ -0.32
ZNF253O75346 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC13.08□□□□□ -0.32
ZNF253O75346 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC13.08□□□□□ -0.32
ZNF253O75346 AC073912.3-201ENST00000624414 853 ntBASIC13.08□□□□□ -0.32
ZNF253O75346 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC13.08□□□□□ -0.32
ZNF253O75346 VPS72-207ENST00000640458 689 ntTSL 5 BASIC13.08□□□□□ -0.32
ZNF253O75346 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
ZNF253O75346 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
ZNF253O75346 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC13.08□□□□□ -0.32
ZNF253O75346 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
ZNF253O75346 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
ZNF253O75346 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
ZNF253O75346 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC13.08□□□□□ -0.32
ZNF253O75346 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
ZNF253O75346 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
ZNF253O75346 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
ZNF253O75346 AL135999.2-201ENST00000622438 1686 ntBASIC13.08□□□□□ -0.32
ZNF253O75346 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
ZNF253O75346 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
ZNF253O75346 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC13.08□□□□□ -0.32
ZNF253O75346 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
ZNF253O75346 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
ZNF253O75346 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
ZNF253O75346 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC13.08□□□□□ -0.32
ZNF253O75346 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC13.07□□□□□ -0.32
ZNF253O75346 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
ZNF253O75346 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC13.07□□□□□ -0.32
ZNF253O75346 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
ZNF253O75346 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC13.07□□□□□ -0.32
ZNF253O75346 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
ZNF253O75346 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
ZNF253O75346 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC13.07□□□□□ -0.32
ZNF253O75346 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC13.07□□□□□ -0.32
ZNF253O75346 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
ZNF253O75346 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC13.07□□□□□ -0.32
ZNF253O75346 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC13.07□□□□□ -0.32
ZNF253O75346 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
ZNF253O75346 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
ZNF253O75346 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
ZNF253O75346 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
ZNF253O75346 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
ZNF253O75346 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
ZNF253O75346 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
ZNF253O75346 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
ZNF253O75346 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
ZNF253O75346 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
ZNF253O75346 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC13.07□□□□□ -0.32
ZNF253O75346 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC13.07□□□□□ -0.32
ZNF253O75346 TSPY22P-201ENST00000427496 604 ntBASIC13.07□□□□□ -0.32
ZNF253O75346 SPDYE13P-201ENST00000445314 798 ntBASIC13.07□□□□□ -0.32
ZNF253O75346 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC13.07□□□□□ -0.32
ZNF253O75346 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
ZNF253O75346 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
ZNF253O75346 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
ZNF253O75346 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC13.07□□□□□ -0.32
ZNF253O75346 LINC01238-205ENST00000567549 1107 ntBASIC13.07□□□□□ -0.32
ZNF253O75346 AC005336.2-201ENST00000593183 939 ntBASIC13.07□□□□□ -0.32
ZNF253O75346 AC083849.1-201ENST00000615227 514 ntBASIC13.07□□□□□ -0.32
ZNF253O75346 AC124864.1-201ENST00000623408 392 ntBASIC13.07□□□□□ -0.32
ZNF253O75346 DFFB-212ENST00000625756 649 ntTSL 5 BASIC13.07□□□□□ -0.32
ZNF253O75346 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
ZNF253O75346 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC13.07□□□□□ -0.32
ZNF253O75346 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
ZNF253O75346 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
ZNF253O75346 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
ZNF253O75346 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
ZNF253O75346 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
ZNF253O75346 MAP3K12-201ENST00000267079 4319 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
ZNF253O75346 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
ZNF253O75346 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
ZNF253O75346 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC13.07□□□□□ -0.32
ZNF253O75346 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC13.07□□□□□ -0.32
ZNF253O75346 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
ZNF253O75346 FRMD8P1-201ENST00000440433 1524 ntBASIC13.07□□□□□ -0.32
ZNF253O75346 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
ZNF253O75346 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC13.07□□□□□ -0.32
ZNF253O75346 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
ZNF253O75346 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC13.07□□□□□ -0.32
ZNF253O75346 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
ZNF253O75346 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
ZNF253O75346 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms