Protein–RNA interactions for Protein: O60880

SH2D1A, SH2 domain-containing protein 1A, humanhuman

Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D1AO60880 HNRNPRP1-201ENST00000453465 1695 ntBASIC12.54□□□□□ -0.4
SH2D1AO60880 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
SH2D1AO60880 NID2-208ENST00000617139 3827 ntTSL 5 BASIC12.54□□□□□ -0.4
SH2D1AO60880 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC12.54□□□□□ -0.4
SH2D1AO60880 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SH2D1AO60880 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
SH2D1AO60880 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SH2D1AO60880 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC12.54□□□□□ -0.4
SH2D1AO60880 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
SH2D1AO60880 DBET-201ENST00000630918 3363 ntBASIC12.53□□□□□ -0.4
SH2D1AO60880 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
SH2D1AO60880 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC12.53□□□□□ -0.4
SH2D1AO60880 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC12.53□□□□□ -0.4
SH2D1AO60880 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
SH2D1AO60880 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
SH2D1AO60880 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC12.53□□□□□ -0.4
SH2D1AO60880 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
SH2D1AO60880 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
SH2D1AO60880 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC12.53□□□□□ -0.4
SH2D1AO60880 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC12.53□□□□□ -0.4
SH2D1AO60880 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC12.53□□□□□ -0.4
SH2D1AO60880 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
SH2D1AO60880 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
SH2D1AO60880 MIR600HG-201ENST00000449175 5984 ntBASIC12.53□□□□□ -0.4
SH2D1AO60880 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
SH2D1AO60880 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
SH2D1AO60880 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC12.53□□□□□ -0.4
SH2D1AO60880 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
SH2D1AO60880 AP002414.1-201ENST00000391405 1147 ntBASIC12.53□□□□□ -0.4
SH2D1AO60880 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC12.53□□□□□ -0.4
SH2D1AO60880 AL645929.1-201ENST00000420084 975 ntBASIC12.53□□□□□ -0.4
SH2D1AO60880 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC12.53□□□□□ -0.4
SH2D1AO60880 SIGLEC30P-201ENST00000455569 941 ntBASIC12.53□□□□□ -0.4
SH2D1AO60880 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC12.53□□□□□ -0.4
SH2D1AO60880 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC12.53□□□□□ -0.4
SH2D1AO60880 LY6E-213ENST00000522528 606 ntTSL 3 BASIC12.53□□□□□ -0.4
SH2D1AO60880 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
SH2D1AO60880 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC12.53□□□□□ -0.4
SH2D1AO60880 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC12.53□□□□□ -0.4
SH2D1AO60880 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
SH2D1AO60880 AC011467.2-201ENST00000598425 242 ntBASIC12.53□□□□□ -0.4
SH2D1AO60880 AC005363.2-201ENST00000618631 242 ntBASIC12.53□□□□□ -0.4
SH2D1AO60880 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
SH2D1AO60880 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
SH2D1AO60880 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC12.53□□□□□ -0.4
SH2D1AO60880 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
SH2D1AO60880 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
SH2D1AO60880 AC010491.1-201ENST00000563101 2797 ntBASIC12.53□□□□□ -0.4
SH2D1AO60880 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
SH2D1AO60880 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
SH2D1AO60880 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
SH2D1AO60880 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
SH2D1AO60880 GGT4P-201ENST00000623672 1708 ntBASIC12.53□□□□□ -0.4
SH2D1AO60880 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
SH2D1AO60880 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
SH2D1AO60880 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC12.53□□□□□ -0.4
SH2D1AO60880 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC12.53□□□□□ -0.4
SH2D1AO60880 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC12.53□□□□□ -0.4
SH2D1AO60880 MST1L-201ENST00000442552 2185 ntBASIC12.53□□□□□ -0.4
SH2D1AO60880 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
SH2D1AO60880 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
SH2D1AO60880 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC12.53□□□□□ -0.4
SH2D1AO60880 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
SH2D1AO60880 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
SH2D1AO60880 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
SH2D1AO60880 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
SH2D1AO60880 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC12.52□□□□□ -0.4
SH2D1AO60880 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
SH2D1AO60880 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.4
SH2D1AO60880 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.4
SH2D1AO60880 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
SH2D1AO60880 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC12.52□□□□□ -0.4
SH2D1AO60880 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
SH2D1AO60880 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
SH2D1AO60880 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
SH2D1AO60880 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.4
SH2D1AO60880 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC12.52□□□□□ -0.4
SH2D1AO60880 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.4
SH2D1AO60880 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC12.52□□□□□ -0.4
SH2D1AO60880 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
SH2D1AO60880 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
SH2D1AO60880 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC12.52□□□□□ -0.41
SH2D1AO60880 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
SH2D1AO60880 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC12.52□□□□□ -0.41
SH2D1AO60880 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
SH2D1AO60880 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
SH2D1AO60880 CTNS-203ENST00000399306 803 ntTSL 3 BASIC12.52□□□□□ -0.41
SH2D1AO60880 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
SH2D1AO60880 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC12.52□□□□□ -0.41
SH2D1AO60880 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC12.52□□□□□ -0.41
SH2D1AO60880 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC12.52□□□□□ -0.41
SH2D1AO60880 AC013467.2-201ENST00000605472 835 ntBASIC12.52□□□□□ -0.41
SH2D1AO60880 AC083849.1-201ENST00000615227 514 ntBASIC12.52□□□□□ -0.41
SH2D1AO60880 SP100-205ENST00000409824 1802 ntTSL 5 BASIC12.52□□□□□ -0.41
SH2D1AO60880 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
SH2D1AO60880 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC12.52□□□□□ -0.41
SH2D1AO60880 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC12.52□□□□□ -0.41
SH2D1AO60880 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
SH2D1AO60880 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
SH2D1AO60880 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 40.9 ms