Protein–RNA interactions for Protein: O43909

EXTL3, Exostosin-like 3, humanhuman

Predictions only

Length 919 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EXTL3O43909 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
EXTL3O43909 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
EXTL3O43909 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
EXTL3O43909 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
EXTL3O43909 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC18.07■□□□□ 0.48
EXTL3O43909 ACTG1P14-201ENST00000446382 1122 ntBASIC18.07■□□□□ 0.48
EXTL3O43909 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
EXTL3O43909 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC18.07■□□□□ 0.48
EXTL3O43909 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC18.07■□□□□ 0.48
EXTL3O43909 IGHV3OR16-6-201ENST00000568775 360 ntBASIC18.07■□□□□ 0.48
EXTL3O43909 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC18.07■□□□□ 0.48
EXTL3O43909 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC18.07■□□□□ 0.48
EXTL3O43909 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC18.07■□□□□ 0.48
EXTL3O43909 AC020765.3-201ENST00000613051 740 ntBASIC18.07■□□□□ 0.48
EXTL3O43909 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
EXTL3O43909 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC18.07■□□□□ 0.48
EXTL3O43909 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
EXTL3O43909 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC18.07■□□□□ 0.48
EXTL3O43909 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
EXTL3O43909 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC18.07■□□□□ 0.48
EXTL3O43909 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
EXTL3O43909 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
EXTL3O43909 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
EXTL3O43909 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC18.07■□□□□ 0.48
EXTL3O43909 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
EXTL3O43909 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
EXTL3O43909 WASH6P-202ENST00000359512 1437 ntBASIC18.06■□□□□ 0.48
EXTL3O43909 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
EXTL3O43909 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC18.06■□□□□ 0.48
EXTL3O43909 AC016027.1-202ENST00000607927 1699 ntBASIC18.06■□□□□ 0.48
EXTL3O43909 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
EXTL3O43909 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
EXTL3O43909 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
EXTL3O43909 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
EXTL3O43909 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
EXTL3O43909 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
EXTL3O43909 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
EXTL3O43909 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
EXTL3O43909 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC18.06■□□□□ 0.48
EXTL3O43909 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC18.06■□□□□ 0.48
EXTL3O43909 RARRES2P8-201ENST00000566335 367 ntBASIC18.06■□□□□ 0.48
EXTL3O43909 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
EXTL3O43909 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
EXTL3O43909 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
EXTL3O43909 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
EXTL3O43909 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
EXTL3O43909 AC079781.4-201ENST00000641908 219 ntBASIC18.06■□□□□ 0.48
EXTL3O43909 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
EXTL3O43909 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
EXTL3O43909 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
EXTL3O43909 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC18.06■□□□□ 0.48
EXTL3O43909 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
EXTL3O43909 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
EXTL3O43909 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
EXTL3O43909 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
EXTL3O43909 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
EXTL3O43909 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
EXTL3O43909 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
EXTL3O43909 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
EXTL3O43909 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC18.05■□□□□ 0.48
EXTL3O43909 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
EXTL3O43909 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
EXTL3O43909 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
EXTL3O43909 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
EXTL3O43909 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
EXTL3O43909 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
EXTL3O43909 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
EXTL3O43909 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
EXTL3O43909 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
EXTL3O43909 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC18.05■□□□□ 0.48
EXTL3O43909 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
EXTL3O43909 CD82-202ENST00000342935 967 ntTSL 5 BASIC18.05■□□□□ 0.48
EXTL3O43909 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
EXTL3O43909 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
EXTL3O43909 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
EXTL3O43909 COA5-202ENST00000409997 557 ntTSL 4 BASIC18.05■□□□□ 0.48
EXTL3O43909 AL355306.1-201ENST00000415580 579 ntBASIC18.05■□□□□ 0.48
EXTL3O43909 AL671277.1-201ENST00000429656 993 ntBASIC18.05■□□□□ 0.48
EXTL3O43909 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC18.05■□□□□ 0.48
EXTL3O43909 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC18.05■□□□□ 0.48
EXTL3O43909 CFL1-202ENST00000524553 860 ntTSL 2 BASIC18.05■□□□□ 0.48
EXTL3O43909 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC18.05■□□□□ 0.48
EXTL3O43909 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC18.05■□□□□ 0.48
EXTL3O43909 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC18.05■□□□□ 0.48
EXTL3O43909 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC18.05■□□□□ 0.48
EXTL3O43909 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC18.05■□□□□ 0.48
EXTL3O43909 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
EXTL3O43909 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
EXTL3O43909 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC18.05■□□□□ 0.48
EXTL3O43909 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
EXTL3O43909 PCDHA14-201ENST00000506751 2298 ntBASIC18.05■□□□□ 0.48
EXTL3O43909 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC18.05■□□□□ 0.48
EXTL3O43909 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
EXTL3O43909 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
EXTL3O43909 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
EXTL3O43909 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC18.04■□□□□ 0.48
EXTL3O43909 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC18.04■□□□□ 0.48
EXTL3O43909 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
EXTL3O43909 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
EXTL3O43909 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC18.04■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms