Protein–RNA interactions for Protein: O43556

SGCE, Epsilon-sarcoglycan, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SGCEO43556 MED22-202ENST00000371999 987 ntTSL 3 BASIC14.84□□□□□ -0.03
SGCEO43556 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC14.84□□□□□ -0.03
SGCEO43556 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
SGCEO43556 KRT18P27-201ENST00000427733 1299 ntBASIC14.84□□□□□ -0.03
SGCEO43556 AC079781.3-201ENST00000449110 356 ntBASIC14.84□□□□□ -0.03
SGCEO43556 AC018712.1-201ENST00000455767 687 ntBASIC14.84□□□□□ -0.03
SGCEO43556 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC14.84□□□□□ -0.03
SGCEO43556 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC14.84□□□□□ -0.03
SGCEO43556 AC136632.2-201ENST00000512891 861 ntBASIC14.84□□□□□ -0.03
SGCEO43556 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC14.84□□□□□ -0.03
SGCEO43556 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC14.84□□□□□ -0.03
SGCEO43556 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC14.84□□□□□ -0.03
SGCEO43556 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
SGCEO43556 VPS51-217ENST00000639871 243 ntTSL 5 BASIC14.84□□□□□ -0.03
SGCEO43556 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC14.84□□□□□ -0.03
SGCEO43556 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC14.84□□□□□ -0.03
SGCEO43556 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC14.84□□□□□ -0.03
SGCEO43556 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC14.84□□□□□ -0.03
SGCEO43556 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
SGCEO43556 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
SGCEO43556 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC14.84□□□□□ -0.03
SGCEO43556 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC14.84□□□□□ -0.03
SGCEO43556 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SGCEO43556 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
SGCEO43556 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
SGCEO43556 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
SGCEO43556 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
SGCEO43556 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC14.84□□□□□ -0.03
SGCEO43556 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SGCEO43556 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC14.84□□□□□ -0.03
SGCEO43556 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
SGCEO43556 C8orf49-201ENST00000525043 1968 ntBASIC14.84□□□□□ -0.03
SGCEO43556 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC14.84□□□□□ -0.03
SGCEO43556 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.03
SGCEO43556 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
SGCEO43556 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC14.83□□□□□ -0.03
SGCEO43556 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC14.83□□□□□ -0.03
SGCEO43556 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.03
SGCEO43556 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC14.83□□□□□ -0.03
SGCEO43556 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC14.83□□□□□ -0.04
SGCEO43556 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
SGCEO43556 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
SGCEO43556 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
SGCEO43556 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC14.83□□□□□ -0.04
SGCEO43556 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
SGCEO43556 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
SGCEO43556 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
SGCEO43556 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC14.83□□□□□ -0.04
SGCEO43556 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
SGCEO43556 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC14.83□□□□□ -0.04
SGCEO43556 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
SGCEO43556 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC14.83□□□□□ -0.04
SGCEO43556 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC14.83□□□□□ -0.04
SGCEO43556 AC087163.2-201ENST00000457299 853 ntBASIC14.83□□□□□ -0.04
SGCEO43556 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC14.83□□□□□ -0.04
SGCEO43556 RPS15P9-201ENST00000494093 319 ntBASIC14.83□□□□□ -0.04
SGCEO43556 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC14.83□□□□□ -0.04
SGCEO43556 GGTLC5P-201ENST00000617623 998 ntBASIC14.83□□□□□ -0.04
SGCEO43556 AL031008.1-201ENST00000619963 541 ntBASIC14.83□□□□□ -0.04
SGCEO43556 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC14.83□□□□□ -0.04
SGCEO43556 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
SGCEO43556 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
SGCEO43556 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC14.83□□□□□ -0.04
SGCEO43556 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
SGCEO43556 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
SGCEO43556 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
SGCEO43556 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
SGCEO43556 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
SGCEO43556 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC14.83□□□□□ -0.04
SGCEO43556 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
SGCEO43556 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
SGCEO43556 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
SGCEO43556 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
SGCEO43556 C1R-202ENST00000536053 2347 ntTSL 2 BASIC14.82□□□□□ -0.04
SGCEO43556 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC14.82□□□□□ -0.04
SGCEO43556 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SGCEO43556 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
SGCEO43556 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
SGCEO43556 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
SGCEO43556 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC14.82□□□□□ -0.04
SGCEO43556 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC14.82□□□□□ -0.04
SGCEO43556 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SGCEO43556 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
SGCEO43556 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC14.82□□□□□ -0.04
SGCEO43556 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC14.82□□□□□ -0.04
SGCEO43556 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC14.82□□□□□ -0.04
SGCEO43556 AC073621.1-201ENST00000392730 636 ntBASIC14.82□□□□□ -0.04
SGCEO43556 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC14.82□□□□□ -0.04
SGCEO43556 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC14.82□□□□□ -0.04
SGCEO43556 MOK-208ENST00000519058 917 ntTSL 2 BASIC14.82□□□□□ -0.04
SGCEO43556 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SGCEO43556 ETFA-208ENST00000559602 792 ntTSL 3 BASIC14.82□□□□□ -0.04
SGCEO43556 AC105339.3-201ENST00000560043 636 ntBASIC14.82□□□□□ -0.04
SGCEO43556 CALM3-211ENST00000598871 561 ntTSL 4 BASIC14.82□□□□□ -0.04
SGCEO43556 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
SGCEO43556 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
SGCEO43556 CA12-203ENST00000422263 2556 ntTSL 2 BASIC14.82□□□□□ -0.04
SGCEO43556 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC14.82□□□□□ -0.04
SGCEO43556 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
SGCEO43556 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC14.82□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 44.9 ms