Protein–RNA interactions for Protein: O43295

SRGAP3, SLIT-ROBO Rho GTPase-activating protein 3, humanhuman

Predictions only

Length 1,099 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3O43295 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SRGAP3O43295 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
SRGAP3O43295 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SRGAP3O43295 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SRGAP3O43295 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC20.67■□□□□ 0.9
SRGAP3O43295 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC20.67■□□□□ 0.9
SRGAP3O43295 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
SRGAP3O43295 FAM86C2P-203ENST00000528684 1004 ntBASIC20.67■□□□□ 0.9
SRGAP3O43295 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
SRGAP3O43295 INO80E-210ENST00000567705 880 ntTSL 3 BASIC20.67■□□□□ 0.9
SRGAP3O43295 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC20.67■□□□□ 0.9
SRGAP3O43295 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC20.67■□□□□ 0.9
SRGAP3O43295 AC026120.1-201ENST00000611536 926 ntBASIC20.67■□□□□ 0.9
SRGAP3O43295 GPALPP1-207ENST00000611650 899 ntBASIC20.67■□□□□ 0.9
SRGAP3O43295 AC105339.1-204ENST00000636249 355 ntBASIC20.67■□□□□ 0.9
SRGAP3O43295 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC20.67■□□□□ 0.9
SRGAP3O43295 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
SRGAP3O43295 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
SRGAP3O43295 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
SRGAP3O43295 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
SRGAP3O43295 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
SRGAP3O43295 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC20.67■□□□□ 0.9
SRGAP3O43295 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC20.67■□□□□ 0.9
SRGAP3O43295 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SRGAP3O43295 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SRGAP3O43295 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SRGAP3O43295 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SRGAP3O43295 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
SRGAP3O43295 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
SRGAP3O43295 OS9-205ENST00000413095 1660 ntTSL 2 BASIC20.67■□□□□ 0.9
SRGAP3O43295 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC20.67■□□□□ 0.9
SRGAP3O43295 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC20.67■□□□□ 0.9
SRGAP3O43295 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC20.66■□□□□ 0.9
SRGAP3O43295 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
SRGAP3O43295 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC20.66■□□□□ 0.9
SRGAP3O43295 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SRGAP3O43295 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
SRGAP3O43295 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
SRGAP3O43295 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
SRGAP3O43295 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SRGAP3O43295 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SRGAP3O43295 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SRGAP3O43295 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SRGAP3O43295 STOM-202ENST00000347359 870 ntTSL 2 BASIC20.66■□□□□ 0.9
SRGAP3O43295 DPM2-202ENST00000373110 738 ntTSL 2 BASIC20.66■□□□□ 0.9
SRGAP3O43295 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SRGAP3O43295 RPS8P6-201ENST00000426177 609 ntBASIC20.66■□□□□ 0.9
SRGAP3O43295 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC20.66■□□□□ 0.9
SRGAP3O43295 AP006288.1-201ENST00000446065 395 ntBASIC20.66■□□□□ 0.9
SRGAP3O43295 TIMM8BP1-201ENST00000452384 211 ntBASIC20.66■□□□□ 0.9
SRGAP3O43295 AC243562.1-201ENST00000560672 389 ntBASIC20.66■□□□□ 0.9
SRGAP3O43295 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC20.66■□□□□ 0.9
SRGAP3O43295 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
SRGAP3O43295 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC20.66■□□□□ 0.9
SRGAP3O43295 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC20.66■□□□□ 0.9
SRGAP3O43295 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC20.66■□□□□ 0.9
SRGAP3O43295 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC20.66■□□□□ 0.9
SRGAP3O43295 AKAP8P1-201ENST00000434743 1349 ntBASIC20.66■□□□□ 0.9
SRGAP3O43295 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC20.66■□□□□ 0.9
SRGAP3O43295 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC20.66■□□□□ 0.9
SRGAP3O43295 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SRGAP3O43295 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SRGAP3O43295 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
SRGAP3O43295 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC20.66■□□□□ 0.9
SRGAP3O43295 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC20.66■□□□□ 0.9
SRGAP3O43295 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SRGAP3O43295 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SRGAP3O43295 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SRGAP3O43295 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
SRGAP3O43295 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
SRGAP3O43295 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC20.65■□□□□ 0.9
SRGAP3O43295 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
SRGAP3O43295 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
SRGAP3O43295 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SRGAP3O43295 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC20.65■□□□□ 0.9
SRGAP3O43295 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
SRGAP3O43295 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC20.65■□□□□ 0.9
SRGAP3O43295 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SRGAP3O43295 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
SRGAP3O43295 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC20.65■□□□□ 0.9
SRGAP3O43295 BSG-215ENST00000618006 1329 ntTSL 2 BASIC20.65■□□□□ 0.9
SRGAP3O43295 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC20.65■□□□□ 0.9
SRGAP3O43295 DNAJB3-202ENST00000449667 1266 ntBASIC20.65■□□□□ 0.9
SRGAP3O43295 SPDYE11-202ENST00000450699 704 ntBASIC20.65■□□□□ 0.9
SRGAP3O43295 CCND1-203ENST00000536559 553 ntTSL 3 BASIC20.65■□□□□ 0.9
SRGAP3O43295 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC20.65■□□□□ 0.9
SRGAP3O43295 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SRGAP3O43295 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC20.65■□□□□ 0.9
SRGAP3O43295 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC20.65■□□□□ 0.9
SRGAP3O43295 SPDYE9P-201ENST00000570642 692 ntBASIC20.65■□□□□ 0.9
SRGAP3O43295 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC20.65■□□□□ 0.9
SRGAP3O43295 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
SRGAP3O43295 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC20.65■□□□□ 0.9
SRGAP3O43295 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
SRGAP3O43295 AC022145.2-201ENST00000598203 171 ntBASIC20.65■□□□□ 0.9
SRGAP3O43295 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC20.65■□□□□ 0.9
SRGAP3O43295 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC20.65■□□□□ 0.9
SRGAP3O43295 SPDYE10P-202ENST00000612005 668 ntBASIC20.65■□□□□ 0.9
SRGAP3O43295 SPDYE8P-202ENST00000612377 668 ntBASIC20.65■□□□□ 0.9
SRGAP3O43295 AL513210.1-201ENST00000629608 234 ntBASIC20.65■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms