Protein–RNA interactions for Protein: H3BSU7

TMX2-CTNND1, TMX2-CTNND1 readthrough (NMD candidate), humanhuman

Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMX2-CTNND1H3BSU7 OR6D1P-202ENST00000641007 5290 ntBASIC16.45■□□□□ 0.22
TMX2-CTNND1H3BSU7 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
TMX2-CTNND1H3BSU7 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TMX2-CTNND1H3BSU7 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TMX2-CTNND1H3BSU7 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC16.45■□□□□ 0.22
TMX2-CTNND1H3BSU7 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
TMX2-CTNND1H3BSU7 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TMX2-CTNND1H3BSU7 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC16.45■□□□□ 0.22
TMX2-CTNND1H3BSU7 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
TMX2-CTNND1H3BSU7 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC16.45■□□□□ 0.22
TMX2-CTNND1H3BSU7 PAWRP1-201ENST00000451083 565 ntBASIC16.45■□□□□ 0.22
TMX2-CTNND1H3BSU7 HLA-J-203ENST00000494367 1087 ntBASIC16.45■□□□□ 0.22
TMX2-CTNND1H3BSU7 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC16.45■□□□□ 0.22
TMX2-CTNND1H3BSU7 AL645728.2-201ENST00000641974 660 ntBASIC16.45■□□□□ 0.22
TMX2-CTNND1H3BSU7 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC16.45■□□□□ 0.22
TMX2-CTNND1H3BSU7 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC16.45■□□□□ 0.22
TMX2-CTNND1H3BSU7 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC16.45■□□□□ 0.22
TMX2-CTNND1H3BSU7 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
TMX2-CTNND1H3BSU7 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
TMX2-CTNND1H3BSU7 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC16.45■□□□□ 0.22
TMX2-CTNND1H3BSU7 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
TMX2-CTNND1H3BSU7 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC16.45■□□□□ 0.22
TMX2-CTNND1H3BSU7 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TMX2-CTNND1H3BSU7 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
TMX2-CTNND1H3BSU7 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC16.45■□□□□ 0.22
TMX2-CTNND1H3BSU7 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
TMX2-CTNND1H3BSU7 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC16.45■□□□□ 0.22
TMX2-CTNND1H3BSU7 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC16.45■□□□□ 0.22
TMX2-CTNND1H3BSU7 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC16.44■□□□□ 0.22
TMX2-CTNND1H3BSU7 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC16.44■□□□□ 0.22
TMX2-CTNND1H3BSU7 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
TMX2-CTNND1H3BSU7 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC16.44■□□□□ 0.22
TMX2-CTNND1H3BSU7 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TMX2-CTNND1H3BSU7 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
TMX2-CTNND1H3BSU7 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TMX2-CTNND1H3BSU7 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC16.44■□□□□ 0.22
TMX2-CTNND1H3BSU7 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
TMX2-CTNND1H3BSU7 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC16.44■□□□□ 0.22
TMX2-CTNND1H3BSU7 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TMX2-CTNND1H3BSU7 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC16.44■□□□□ 0.22
TMX2-CTNND1H3BSU7 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
TMX2-CTNND1H3BSU7 GOLGA6L17P-202ENST00000614358 1398 ntBASIC16.44■□□□□ 0.22
TMX2-CTNND1H3BSU7 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
TMX2-CTNND1H3BSU7 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TMX2-CTNND1H3BSU7 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC16.44■□□□□ 0.22
TMX2-CTNND1H3BSU7 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
TMX2-CTNND1H3BSU7 AC004461.1-201ENST00000412461 403 ntBASIC16.44■□□□□ 0.22
TMX2-CTNND1H3BSU7 FALEC-201ENST00000416894 566 ntTSL 3 BASIC16.44■□□□□ 0.22
TMX2-CTNND1H3BSU7 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC16.44■□□□□ 0.22
TMX2-CTNND1H3BSU7 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC16.44■□□□□ 0.22
TMX2-CTNND1H3BSU7 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC16.44■□□□□ 0.22
TMX2-CTNND1H3BSU7 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC16.44■□□□□ 0.22
TMX2-CTNND1H3BSU7 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC16.44■□□□□ 0.22
TMX2-CTNND1H3BSU7 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC16.44■□□□□ 0.22
TMX2-CTNND1H3BSU7 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC16.44■□□□□ 0.22
TMX2-CTNND1H3BSU7 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC16.44■□□□□ 0.22
TMX2-CTNND1H3BSU7 DAD1-205ENST00000543337 501 ntTSL 3 BASIC16.44■□□□□ 0.22
TMX2-CTNND1H3BSU7 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC16.44■□□□□ 0.22
TMX2-CTNND1H3BSU7 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC16.44■□□□□ 0.22
TMX2-CTNND1H3BSU7 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
TMX2-CTNND1H3BSU7 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC16.44■□□□□ 0.22
TMX2-CTNND1H3BSU7 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TMX2-CTNND1H3BSU7 AMT-250ENST00000637682 1823 ntTSL 5 BASIC16.44■□□□□ 0.22
TMX2-CTNND1H3BSU7 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TMX2-CTNND1H3BSU7 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
TMX2-CTNND1H3BSU7 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TMX2-CTNND1H3BSU7 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC16.44■□□□□ 0.22
TMX2-CTNND1H3BSU7 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
TMX2-CTNND1H3BSU7 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TMX2-CTNND1H3BSU7 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
TMX2-CTNND1H3BSU7 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TMX2-CTNND1H3BSU7 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
TMX2-CTNND1H3BSU7 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC16.44■□□□□ 0.22
TMX2-CTNND1H3BSU7 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC16.44■□□□□ 0.22
TMX2-CTNND1H3BSU7 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TMX2-CTNND1H3BSU7 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
TMX2-CTNND1H3BSU7 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TMX2-CTNND1H3BSU7 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
TMX2-CTNND1H3BSU7 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TMX2-CTNND1H3BSU7 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC16.43■□□□□ 0.22
TMX2-CTNND1H3BSU7 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TMX2-CTNND1H3BSU7 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TMX2-CTNND1H3BSU7 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TMX2-CTNND1H3BSU7 BANP-201ENST00000286122 2368 ntTSL 5 BASIC16.43■□□□□ 0.22
TMX2-CTNND1H3BSU7 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC16.43■□□□□ 0.22
TMX2-CTNND1H3BSU7 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC16.43■□□□□ 0.22
TMX2-CTNND1H3BSU7 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC16.43■□□□□ 0.22
TMX2-CTNND1H3BSU7 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TMX2-CTNND1H3BSU7 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
TMX2-CTNND1H3BSU7 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TMX2-CTNND1H3BSU7 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC16.43■□□□□ 0.22
TMX2-CTNND1H3BSU7 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC16.43■□□□□ 0.22
TMX2-CTNND1H3BSU7 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC16.43■□□□□ 0.22
TMX2-CTNND1H3BSU7 AC023141.5-201ENST00000458585 616 ntBASIC16.43■□□□□ 0.22
TMX2-CTNND1H3BSU7 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC16.43■□□□□ 0.22
TMX2-CTNND1H3BSU7 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
TMX2-CTNND1H3BSU7 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC16.43■□□□□ 0.22
TMX2-CTNND1H3BSU7 CYB561-216ENST00000582297 897 ntTSL 3 BASIC16.43■□□□□ 0.22
TMX2-CTNND1H3BSU7 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
TMX2-CTNND1H3BSU7 AC093028.1-201ENST00000622998 982 ntBASIC16.43■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 42.9 ms