Protein–RNA interactions for Protein: A3KN83

SBNO1, Protein strawberry notch homolog 1, humanhuman

Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SBNO1A3KN83 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC22.32■■□□□ 1.16
SBNO1A3KN83 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
SBNO1A3KN83 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC22.32■■□□□ 1.16
SBNO1A3KN83 TMEM261P1-201ENST00000604899 340 ntBASIC22.32■■□□□ 1.16
SBNO1A3KN83 AC133552.6-201ENST00000613406 534 ntBASIC22.32■■□□□ 1.16
SBNO1A3KN83 SNX12-206ENST00000622259 661 ntTSL 5 BASIC22.32■■□□□ 1.16
SBNO1A3KN83 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC22.32■■□□□ 1.16
SBNO1A3KN83 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
SBNO1A3KN83 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
SBNO1A3KN83 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC22.32■■□□□ 1.16
SBNO1A3KN83 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC22.32■■□□□ 1.16
SBNO1A3KN83 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC22.32■■□□□ 1.16
SBNO1A3KN83 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC22.32■■□□□ 1.16
SBNO1A3KN83 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
SBNO1A3KN83 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
SBNO1A3KN83 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
SBNO1A3KN83 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
SBNO1A3KN83 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
SBNO1A3KN83 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC22.31■■□□□ 1.16
SBNO1A3KN83 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
SBNO1A3KN83 PP12613-201ENST00000424958 2230 ntBASIC22.31■■□□□ 1.16
SBNO1A3KN83 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC22.31■■□□□ 1.16
SBNO1A3KN83 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC22.31■■□□□ 1.16
SBNO1A3KN83 ATP5J-205ENST00000400094 589 ntAPPRIS P1 TSL 2 BASIC22.31■■□□□ 1.16
SBNO1A3KN83 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
SBNO1A3KN83 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC22.31■■□□□ 1.16
SBNO1A3KN83 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC22.31■■□□□ 1.16
SBNO1A3KN83 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC22.31■■□□□ 1.16
SBNO1A3KN83 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC22.31■■□□□ 1.16
SBNO1A3KN83 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
SBNO1A3KN83 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC22.31■■□□□ 1.16
SBNO1A3KN83 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
SBNO1A3KN83 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
SBNO1A3KN83 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC22.31■■□□□ 1.16
SBNO1A3KN83 AC015936.2-201ENST00000593177 259 ntBASIC22.31■■□□□ 1.16
SBNO1A3KN83 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
SBNO1A3KN83 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC22.31■■□□□ 1.16
SBNO1A3KN83 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
SBNO1A3KN83 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC22.31■■□□□ 1.16
SBNO1A3KN83 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
SBNO1A3KN83 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC22.31■■□□□ 1.16
SBNO1A3KN83 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
SBNO1A3KN83 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
SBNO1A3KN83 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
SBNO1A3KN83 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
SBNO1A3KN83 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC22.3■■□□□ 1.16
SBNO1A3KN83 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC22.3■■□□□ 1.16
SBNO1A3KN83 NSL1-201ENST00000366976 722 ntTSL 2 BASIC22.3■■□□□ 1.16
SBNO1A3KN83 RPF1-202ENST00000370656 724 ntTSL 2 BASIC22.3■■□□□ 1.16
SBNO1A3KN83 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC22.3■■□□□ 1.16
SBNO1A3KN83 BOLA2P3-201ENST00000404566 256 ntBASIC22.3■■□□□ 1.16
SBNO1A3KN83 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
SBNO1A3KN83 MACROD2-AS1-202ENST00000455291 663 ntTSL 2 BASIC22.3■■□□□ 1.16
SBNO1A3KN83 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC22.3■■□□□ 1.16
SBNO1A3KN83 AC092552.1-201ENST00000547243 906 ntBASIC22.3■■□□□ 1.16
SBNO1A3KN83 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
SBNO1A3KN83 RPSAP52-203ENST00000622976 1023 ntBASIC22.3■■□□□ 1.16
SBNO1A3KN83 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
SBNO1A3KN83 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
SBNO1A3KN83 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
SBNO1A3KN83 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC22.3■■□□□ 1.16
SBNO1A3KN83 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC22.3■■□□□ 1.16
SBNO1A3KN83 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC22.29■■□□□ 1.16
SBNO1A3KN83 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
SBNO1A3KN83 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
SBNO1A3KN83 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC22.29■■□□□ 1.16
SBNO1A3KN83 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC22.29■■□□□ 1.16
SBNO1A3KN83 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC22.29■■□□□ 1.16
SBNO1A3KN83 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
SBNO1A3KN83 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
SBNO1A3KN83 FADS2-205ENST00000517839 469 ntTSL 3 BASIC22.29■■□□□ 1.16
SBNO1A3KN83 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC22.29■■□□□ 1.16
SBNO1A3KN83 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
SBNO1A3KN83 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
SBNO1A3KN83 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC22.29■■□□□ 1.16
SBNO1A3KN83 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
SBNO1A3KN83 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
SBNO1A3KN83 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
SBNO1A3KN83 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC22.29■■□□□ 1.16
SBNO1A3KN83 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC22.29■■□□□ 1.16
SBNO1A3KN83 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
SBNO1A3KN83 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC22.29■■□□□ 1.16
SBNO1A3KN83 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC22.28■■□□□ 1.16
SBNO1A3KN83 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC22.28■■□□□ 1.16
SBNO1A3KN83 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC22.28■■□□□ 1.16
SBNO1A3KN83 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC22.28■■□□□ 1.16
SBNO1A3KN83 AL356489.1-201ENST00000449144 1144 ntTSL 3 BASIC22.28■■□□□ 1.16
SBNO1A3KN83 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC22.28■■□□□ 1.16
SBNO1A3KN83 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC22.28■■□□□ 1.16
SBNO1A3KN83 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC22.28■■□□□ 1.16
SBNO1A3KN83 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
SBNO1A3KN83 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
SBNO1A3KN83 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC22.28■■□□□ 1.16
SBNO1A3KN83 AL589702.1-201ENST00000641229 1509 ntBASIC22.28■■□□□ 1.16
SBNO1A3KN83 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC22.28■■□□□ 1.16
SBNO1A3KN83 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC22.28■■□□□ 1.16
SBNO1A3KN83 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC22.28■■□□□ 1.16
SBNO1A3KN83 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
SBNO1A3KN83 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC22.28■■□□□ 1.16
SBNO1A3KN83 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC22.28■■□□□ 1.16
Retrieved 100 of 98,524 protein–RNA pairs in 44.2 ms