Protein–RNA interactions for Protein: A2RUB6

CCDC66, Coiled-coil domain-containing protein 66, humanhuman

Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66A2RUB6 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CCDC66A2RUB6 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CCDC66A2RUB6 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC18.18■□□□□ 0.5
CCDC66A2RUB6 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CCDC66A2RUB6 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CCDC66A2RUB6 EGFEM1P-202ENST00000431685 1563 ntBASIC18.17■□□□□ 0.5
CCDC66A2RUB6 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
CCDC66A2RUB6 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC18.17■□□□□ 0.5
CCDC66A2RUB6 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CCDC66A2RUB6 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC18.17■□□□□ 0.5
CCDC66A2RUB6 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC18.17■□□□□ 0.5
CCDC66A2RUB6 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC18.17■□□□□ 0.5
CCDC66A2RUB6 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CCDC66A2RUB6 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC18.17■□□□□ 0.5
CCDC66A2RUB6 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC18.17■□□□□ 0.5
CCDC66A2RUB6 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
CCDC66A2RUB6 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC18.17■□□□□ 0.5
CCDC66A2RUB6 DAP-202ENST00000432074 1048 ntTSL 2 BASIC18.17■□□□□ 0.5
CCDC66A2RUB6 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC18.17■□□□□ 0.5
CCDC66A2RUB6 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC18.17■□□□□ 0.5
CCDC66A2RUB6 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC18.17■□□□□ 0.5
CCDC66A2RUB6 AL049597.2-201ENST00000565575 961 ntBASIC18.17■□□□□ 0.5
CCDC66A2RUB6 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
CCDC66A2RUB6 AC011498.5-201ENST00000592027 486 ntBASIC18.17■□□□□ 0.5
CCDC66A2RUB6 IGHV3-41-201ENST00000613121 348 ntBASIC18.17■□□□□ 0.5
CCDC66A2RUB6 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC18.17■□□□□ 0.5
CCDC66A2RUB6 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CCDC66A2RUB6 AL353593.2-201ENST00000602529 1483 ntBASIC18.17■□□□□ 0.5
CCDC66A2RUB6 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CCDC66A2RUB6 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
CCDC66A2RUB6 ZNF831-201ENST00000371030 9401 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CCDC66A2RUB6 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CCDC66A2RUB6 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CCDC66A2RUB6 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
CCDC66A2RUB6 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC18.17■□□□□ 0.5
CCDC66A2RUB6 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC18.17■□□□□ 0.5
CCDC66A2RUB6 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CCDC66A2RUB6 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC18.17■□□□□ 0.5
CCDC66A2RUB6 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CCDC66A2RUB6 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CCDC66A2RUB6 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC18.16■□□□□ 0.5
CCDC66A2RUB6 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
CCDC66A2RUB6 UBE2G2-202ENST00000345496 3566 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CCDC66A2RUB6 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC18.16■□□□□ 0.5
CCDC66A2RUB6 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CCDC66A2RUB6 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CCDC66A2RUB6 AC006058.4-201ENST00000624016 1670 ntBASIC18.16■□□□□ 0.5
CCDC66A2RUB6 R3HDM2P2-201ENST00000401880 2116 ntBASIC18.16■□□□□ 0.5
CCDC66A2RUB6 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CCDC66A2RUB6 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC18.16■□□□□ 0.5
CCDC66A2RUB6 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC18.16■□□□□ 0.5
CCDC66A2RUB6 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CCDC66A2RUB6 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CCDC66A2RUB6 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CCDC66A2RUB6 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC18.16■□□□□ 0.5
CCDC66A2RUB6 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC18.16■□□□□ 0.5
CCDC66A2RUB6 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CCDC66A2RUB6 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC18.16■□□□□ 0.5
CCDC66A2RUB6 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC18.16■□□□□ 0.5
CCDC66A2RUB6 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
CCDC66A2RUB6 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CCDC66A2RUB6 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CCDC66A2RUB6 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CCDC66A2RUB6 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CCDC66A2RUB6 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CCDC66A2RUB6 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CCDC66A2RUB6 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CCDC66A2RUB6 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
CCDC66A2RUB6 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CCDC66A2RUB6 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CCDC66A2RUB6 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC18.16■□□□□ 0.5
CCDC66A2RUB6 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC18.15■□□□□ 0.5
CCDC66A2RUB6 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
CCDC66A2RUB6 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CCDC66A2RUB6 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CCDC66A2RUB6 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC18.15■□□□□ 0.5
CCDC66A2RUB6 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
CCDC66A2RUB6 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC18.15■□□□□ 0.5
CCDC66A2RUB6 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC18.15■□□□□ 0.5
CCDC66A2RUB6 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC18.15■□□□□ 0.5
CCDC66A2RUB6 LINC01250-201ENST00000457478 2344 ntTSL 2 BASIC18.15■□□□□ 0.5
CCDC66A2RUB6 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC18.15■□□□□ 0.5
CCDC66A2RUB6 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
CCDC66A2RUB6 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CCDC66A2RUB6 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CCDC66A2RUB6 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
CCDC66A2RUB6 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CCDC66A2RUB6 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC18.15■□□□□ 0.5
CCDC66A2RUB6 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CCDC66A2RUB6 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
CCDC66A2RUB6 AC246785.2-201ENST00000432512 513 ntBASIC18.15■□□□□ 0.5
CCDC66A2RUB6 MEG3-211ENST00000452514 461 ntTSL 3 BASIC18.15■□□□□ 0.5
CCDC66A2RUB6 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CCDC66A2RUB6 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CCDC66A2RUB6 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CCDC66A2RUB6 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC18.15■□□□□ 0.5
CCDC66A2RUB6 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CCDC66A2RUB6 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
CCDC66A2RUB6 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
CCDC66A2RUB6 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 80.9 ms