Protein–RNA interactions for Protein: Q9Y333

LSM2, U6 snRNA-associated Sm-like protein LSm2, humanhuman

Known RBP Predictions only

Length 95 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2Q9Y333 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
LSM2Q9Y333 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
LSM2Q9Y333 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
LSM2Q9Y333 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC21.28■■□□□ 1
LSM2Q9Y333 DUSP8P5-201ENST00000422884 1815 ntBASIC21.28■■□□□ 1
LSM2Q9Y333 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
LSM2Q9Y333 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC21.28■■□□□ 1
LSM2Q9Y333 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
LSM2Q9Y333 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC21.27■■□□□ 1
LSM2Q9Y333 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
LSM2Q9Y333 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC21.27■■□□□ 1
LSM2Q9Y333 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
LSM2Q9Y333 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
LSM2Q9Y333 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
LSM2Q9Y333 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
LSM2Q9Y333 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
LSM2Q9Y333 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC21.26■□□□□ 0.99
LSM2Q9Y333 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC21.26■□□□□ 0.99
LSM2Q9Y333 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
LSM2Q9Y333 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
LSM2Q9Y333 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC21.26■□□□□ 0.99
LSM2Q9Y333 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC21.25■□□□□ 0.99
LSM2Q9Y333 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
LSM2Q9Y333 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
LSM2Q9Y333 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC21.25■□□□□ 0.99
LSM2Q9Y333 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
LSM2Q9Y333 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
LSM2Q9Y333 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
LSM2Q9Y333 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
LSM2Q9Y333 MIR3665-201ENST00000578708 105 ntBASIC21.24■□□□□ 0.99
LSM2Q9Y333 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
LSM2Q9Y333 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
LSM2Q9Y333 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC21.24■□□□□ 0.99
LSM2Q9Y333 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
LSM2Q9Y333 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC21.23■□□□□ 0.99
LSM2Q9Y333 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
LSM2Q9Y333 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
LSM2Q9Y333 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
LSM2Q9Y333 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
LSM2Q9Y333 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
LSM2Q9Y333 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
LSM2Q9Y333 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
LSM2Q9Y333 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
LSM2Q9Y333 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
LSM2Q9Y333 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC21.21■□□□□ 0.99
LSM2Q9Y333 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC21.21■□□□□ 0.99
LSM2Q9Y333 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
LSM2Q9Y333 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
LSM2Q9Y333 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
LSM2Q9Y333 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC21.2■□□□□ 0.98
LSM2Q9Y333 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC21.2■□□□□ 0.98
LSM2Q9Y333 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
LSM2Q9Y333 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
LSM2Q9Y333 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
LSM2Q9Y333 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
LSM2Q9Y333 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
LSM2Q9Y333 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC21.2■□□□□ 0.98
LSM2Q9Y333 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
LSM2Q9Y333 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
LSM2Q9Y333 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
LSM2Q9Y333 AC004812.2-201ENST00000611079 2094 ntBASIC21.19■□□□□ 0.98
LSM2Q9Y333 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
LSM2Q9Y333 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
LSM2Q9Y333 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC21.18■□□□□ 0.98
LSM2Q9Y333 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
LSM2Q9Y333 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC21.18■□□□□ 0.98
LSM2Q9Y333 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
LSM2Q9Y333 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC21.18■□□□□ 0.98
LSM2Q9Y333 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC21.18■□□□□ 0.98
LSM2Q9Y333 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
LSM2Q9Y333 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
LSM2Q9Y333 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC21.17■□□□□ 0.98
LSM2Q9Y333 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
LSM2Q9Y333 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
LSM2Q9Y333 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
LSM2Q9Y333 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
LSM2Q9Y333 ME2-208ENST00000638937 2471 ntTSL 5 BASIC21.16■□□□□ 0.98
LSM2Q9Y333 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
LSM2Q9Y333 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
LSM2Q9Y333 AL359504.2-201ENST00000605506 1601 ntBASIC21.16■□□□□ 0.98
LSM2Q9Y333 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC21.16■□□□□ 0.98
LSM2Q9Y333 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC21.16■□□□□ 0.98
LSM2Q9Y333 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
LSM2Q9Y333 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
LSM2Q9Y333 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
LSM2Q9Y333 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
LSM2Q9Y333 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
LSM2Q9Y333 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
LSM2Q9Y333 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
LSM2Q9Y333 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
LSM2Q9Y333 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
LSM2Q9Y333 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
LSM2Q9Y333 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.98
LSM2Q9Y333 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
LSM2Q9Y333 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
LSM2Q9Y333 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
LSM2Q9Y333 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC21.13■□□□□ 0.97
LSM2Q9Y333 AC087741.3-201ENST00000624270 1347 ntBASIC21.13■□□□□ 0.97
LSM2Q9Y333 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC21.13■□□□□ 0.97
LSM2Q9Y333 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC21.13■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 12.3 ms