Protein–RNA interactions for Protein: Q8NEP3

DNAAF1, Dynein assembly factor 1, axonemal, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNAAF1Q8NEP3 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
DNAAF1Q8NEP3 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC20.86■□□□□ 0.93
DNAAF1Q8NEP3 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
DNAAF1Q8NEP3 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
DNAAF1Q8NEP3 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
DNAAF1Q8NEP3 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
DNAAF1Q8NEP3 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
DNAAF1Q8NEP3 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
DNAAF1Q8NEP3 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
DNAAF1Q8NEP3 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC20.85■□□□□ 0.93
DNAAF1Q8NEP3 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
DNAAF1Q8NEP3 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC20.85■□□□□ 0.93
DNAAF1Q8NEP3 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC20.85■□□□□ 0.93
DNAAF1Q8NEP3 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
DNAAF1Q8NEP3 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
DNAAF1Q8NEP3 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
DNAAF1Q8NEP3 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
DNAAF1Q8NEP3 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC20.84■□□□□ 0.93
DNAAF1Q8NEP3 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
DNAAF1Q8NEP3 AC126177.7-201ENST00000547904 679 ntBASIC20.84■□□□□ 0.93
DNAAF1Q8NEP3 MIR3648-2-201ENST00000581792 180 ntBASIC20.84■□□□□ 0.93
DNAAF1Q8NEP3 MIR3648-1-201ENST00000615959 180 ntBASIC20.84■□□□□ 0.93
DNAAF1Q8NEP3 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
DNAAF1Q8NEP3 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
DNAAF1Q8NEP3 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
DNAAF1Q8NEP3 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC20.83■□□□□ 0.93
DNAAF1Q8NEP3 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC20.83■□□□□ 0.93
DNAAF1Q8NEP3 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
DNAAF1Q8NEP3 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
DNAAF1Q8NEP3 GDI1-215ENST00000630693 786 ntTSL 4 BASIC20.83■□□□□ 0.93
DNAAF1Q8NEP3 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
DNAAF1Q8NEP3 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC20.83■□□□□ 0.93
DNAAF1Q8NEP3 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC20.83■□□□□ 0.92
DNAAF1Q8NEP3 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC20.83■□□□□ 0.92
DNAAF1Q8NEP3 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.92
DNAAF1Q8NEP3 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.92
DNAAF1Q8NEP3 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC20.82■□□□□ 0.92
DNAAF1Q8NEP3 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
DNAAF1Q8NEP3 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
DNAAF1Q8NEP3 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
DNAAF1Q8NEP3 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
DNAAF1Q8NEP3 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
DNAAF1Q8NEP3 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC20.82■□□□□ 0.92
DNAAF1Q8NEP3 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
DNAAF1Q8NEP3 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
DNAAF1Q8NEP3 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC20.81■□□□□ 0.92
DNAAF1Q8NEP3 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC20.81■□□□□ 0.92
DNAAF1Q8NEP3 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
DNAAF1Q8NEP3 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
DNAAF1Q8NEP3 AL359504.2-201ENST00000605506 1601 ntBASIC20.81■□□□□ 0.92
DNAAF1Q8NEP3 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
DNAAF1Q8NEP3 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
DNAAF1Q8NEP3 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
DNAAF1Q8NEP3 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
DNAAF1Q8NEP3 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC20.8■□□□□ 0.92
DNAAF1Q8NEP3 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
DNAAF1Q8NEP3 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
DNAAF1Q8NEP3 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
DNAAF1Q8NEP3 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
DNAAF1Q8NEP3 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
DNAAF1Q8NEP3 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
DNAAF1Q8NEP3 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
DNAAF1Q8NEP3 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
DNAAF1Q8NEP3 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC20.79■□□□□ 0.92
DNAAF1Q8NEP3 MED25-210ENST00000612854 801 ntTSL 5 BASIC20.79■□□□□ 0.92
DNAAF1Q8NEP3 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
DNAAF1Q8NEP3 MED25-214ENST00000622402 642 ntTSL 5 BASIC20.79■□□□□ 0.92
DNAAF1Q8NEP3 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
DNAAF1Q8NEP3 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC20.79■□□□□ 0.92
DNAAF1Q8NEP3 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
DNAAF1Q8NEP3 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
DNAAF1Q8NEP3 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
DNAAF1Q8NEP3 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
DNAAF1Q8NEP3 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
DNAAF1Q8NEP3 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
DNAAF1Q8NEP3 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
DNAAF1Q8NEP3 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
DNAAF1Q8NEP3 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
DNAAF1Q8NEP3 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
DNAAF1Q8NEP3 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
DNAAF1Q8NEP3 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
DNAAF1Q8NEP3 LINC01124-201ENST00000409786 2117 ntBASIC20.77■□□□□ 0.92
DNAAF1Q8NEP3 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
DNAAF1Q8NEP3 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC20.77■□□□□ 0.92
DNAAF1Q8NEP3 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.91
DNAAF1Q8NEP3 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
DNAAF1Q8NEP3 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
DNAAF1Q8NEP3 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
DNAAF1Q8NEP3 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
DNAAF1Q8NEP3 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC20.76■□□□□ 0.91
DNAAF1Q8NEP3 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC20.76■□□□□ 0.91
DNAAF1Q8NEP3 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
DNAAF1Q8NEP3 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
DNAAF1Q8NEP3 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC20.75■□□□□ 0.91
DNAAF1Q8NEP3 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
DNAAF1Q8NEP3 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
DNAAF1Q8NEP3 AC016575.1-201ENST00000607026 382 ntBASIC20.75■□□□□ 0.91
DNAAF1Q8NEP3 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
DNAAF1Q8NEP3 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
DNAAF1Q8NEP3 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC20.74■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 62.7 ms