Protein–RNA interactions for Protein: Q3LHN1

KRTAP21-3, Keratin-associated protein 21-3, humanhuman

Predictions only

Length 58 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP21-3Q3LHN1 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
KRTAP21-3Q3LHN1 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC19.34■□□□□ 0.69
KRTAP21-3Q3LHN1 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
KRTAP21-3Q3LHN1 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
KRTAP21-3Q3LHN1 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
KRTAP21-3Q3LHN1 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
KRTAP21-3Q3LHN1 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
KRTAP21-3Q3LHN1 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
KRTAP21-3Q3LHN1 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC19.33■□□□□ 0.68
KRTAP21-3Q3LHN1 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC19.33■□□□□ 0.68
KRTAP21-3Q3LHN1 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC19.33■□□□□ 0.68
KRTAP21-3Q3LHN1 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC19.33■□□□□ 0.68
KRTAP21-3Q3LHN1 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
KRTAP21-3Q3LHN1 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC19.32■□□□□ 0.68
KRTAP21-3Q3LHN1 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
KRTAP21-3Q3LHN1 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
KRTAP21-3Q3LHN1 ARL16-209ENST00000573715 763 ntTSL 3 BASIC19.32■□□□□ 0.68
KRTAP21-3Q3LHN1 ARL16-211ENST00000576135 694 ntTSL 3 BASIC19.32■□□□□ 0.68
KRTAP21-3Q3LHN1 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC19.32■□□□□ 0.68
KRTAP21-3Q3LHN1 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC19.32■□□□□ 0.68
KRTAP21-3Q3LHN1 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC19.32■□□□□ 0.68
KRTAP21-3Q3LHN1 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC19.32■□□□□ 0.68
KRTAP21-3Q3LHN1 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC19.31■□□□□ 0.68
KRTAP21-3Q3LHN1 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
KRTAP21-3Q3LHN1 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC19.31■□□□□ 0.68
KRTAP21-3Q3LHN1 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC19.31■□□□□ 0.68
KRTAP21-3Q3LHN1 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC19.31■□□□□ 0.68
KRTAP21-3Q3LHN1 AK1-201ENST00000223836 736 ntTSL 3 BASIC19.3■□□□□ 0.68
KRTAP21-3Q3LHN1 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
KRTAP21-3Q3LHN1 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
KRTAP21-3Q3LHN1 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
KRTAP21-3Q3LHN1 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
KRTAP21-3Q3LHN1 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC19.29■□□□□ 0.68
KRTAP21-3Q3LHN1 CD72-202ENST00000378430 585 ntTSL 3 BASIC19.29■□□□□ 0.68
KRTAP21-3Q3LHN1 TFPT-201ENST00000391757 774 ntTSL 5 BASIC19.29■□□□□ 0.68
KRTAP21-3Q3LHN1 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
KRTAP21-3Q3LHN1 SRD5A1P1-201ENST00000442297 786 ntBASIC19.29■□□□□ 0.68
KRTAP21-3Q3LHN1 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC19.29■□□□□ 0.68
KRTAP21-3Q3LHN1 DUX4L19-201ENST00000557448 1267 ntBASIC19.29■□□□□ 0.68
KRTAP21-3Q3LHN1 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC19.29■□□□□ 0.68
KRTAP21-3Q3LHN1 SF1-220ENST00000626028 704 ntTSL 2 BASIC19.29■□□□□ 0.68
KRTAP21-3Q3LHN1 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
KRTAP21-3Q3LHN1 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
KRTAP21-3Q3LHN1 MIR4281-201ENST00000580852 62 ntBASIC19.28■□□□□ 0.68
KRTAP21-3Q3LHN1 SP2-202ENST00000613139 908 ntTSL 5 BASIC19.28■□□□□ 0.68
KRTAP21-3Q3LHN1 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
KRTAP21-3Q3LHN1 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC19.27■□□□□ 0.68
KRTAP21-3Q3LHN1 TK2-208ENST00000545043 1120 ntTSL 2 BASIC19.27■□□□□ 0.68
KRTAP21-3Q3LHN1 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC19.27■□□□□ 0.68
KRTAP21-3Q3LHN1 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC19.27■□□□□ 0.68
KRTAP21-3Q3LHN1 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
KRTAP21-3Q3LHN1 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
KRTAP21-3Q3LHN1 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
KRTAP21-3Q3LHN1 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC19.26■□□□□ 0.67
KRTAP21-3Q3LHN1 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
KRTAP21-3Q3LHN1 SENP5-202ENST00000419026 973 ntTSL 3 BASIC19.26■□□□□ 0.67
KRTAP21-3Q3LHN1 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
KRTAP21-3Q3LHN1 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC19.26■□□□□ 0.67
KRTAP21-3Q3LHN1 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
KRTAP21-3Q3LHN1 AC027682.1-201ENST00000562846 899 ntBASIC19.25■□□□□ 0.67
KRTAP21-3Q3LHN1 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC19.25■□□□□ 0.67
KRTAP21-3Q3LHN1 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
KRTAP21-3Q3LHN1 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
KRTAP21-3Q3LHN1 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
KRTAP21-3Q3LHN1 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
KRTAP21-3Q3LHN1 ADRA2C-202ENST00000509482 1600 ntTSL 3 BASIC19.24■□□□□ 0.67
KRTAP21-3Q3LHN1 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
KRTAP21-3Q3LHN1 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
KRTAP21-3Q3LHN1 HACD1-201ENST00000326961 773 ntTSL 2 BASIC19.23■□□□□ 0.67
KRTAP21-3Q3LHN1 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC19.23■□□□□ 0.67
KRTAP21-3Q3LHN1 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC19.23■□□□□ 0.67
KRTAP21-3Q3LHN1 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
KRTAP21-3Q3LHN1 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
KRTAP21-3Q3LHN1 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
KRTAP21-3Q3LHN1 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
KRTAP21-3Q3LHN1 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
KRTAP21-3Q3LHN1 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
KRTAP21-3Q3LHN1 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC19.22■□□□□ 0.67
KRTAP21-3Q3LHN1 RHOF-204ENST00000537265 699 ntTSL 2 BASIC19.22■□□□□ 0.67
KRTAP21-3Q3LHN1 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
KRTAP21-3Q3LHN1 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
KRTAP21-3Q3LHN1 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
KRTAP21-3Q3LHN1 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
KRTAP21-3Q3LHN1 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
KRTAP21-3Q3LHN1 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC19.21■□□□□ 0.67
KRTAP21-3Q3LHN1 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC19.21■□□□□ 0.67
KRTAP21-3Q3LHN1 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
KRTAP21-3Q3LHN1 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC19.21■□□□□ 0.67
KRTAP21-3Q3LHN1 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC19.2■□□□□ 0.66
KRTAP21-3Q3LHN1 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC19.2■□□□□ 0.66
KRTAP21-3Q3LHN1 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC19.2■□□□□ 0.66
KRTAP21-3Q3LHN1 MAG-206ENST00000597035 542 ntTSL 4 BASIC19.2■□□□□ 0.66
KRTAP21-3Q3LHN1 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
KRTAP21-3Q3LHN1 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
KRTAP21-3Q3LHN1 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
KRTAP21-3Q3LHN1 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
KRTAP21-3Q3LHN1 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
KRTAP21-3Q3LHN1 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC19.19■□□□□ 0.66
KRTAP21-3Q3LHN1 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC19.19■□□□□ 0.66
KRTAP21-3Q3LHN1 AP002414.2-202ENST00000590929 1450 ntBASIC19.19■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms