Protein–RNA interactions for Protein: Q12242

RUP1, UBA domain-containing protein RUP1, yeastyeast

Predictions only

Length 671 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RUP1Q12242 RPN7YPR108W 1290 nt5.98□□□□□ -1.45
RUP1Q12242 KKQ8YKL168C 2175 nt5.98□□□□□ -1.45
RUP1Q12242 FRS2YFL022C 1512 nt5.98□□□□□ -1.45
RUP1Q12242 MKK2YPL140C 1521 nt5.98□□□□□ -1.45
RUP1Q12242 ACC1YNR016C 6702 nt5.98□□□□□ -1.45
RUP1Q12242 CHS5YLR330W 2016 nt5.98□□□□□ -1.45
RUP1Q12242 PYC1YGL062W 3537 nt5.97□□□□□ -1.45
RUP1Q12242 RAD59YDL059C 717 nt5.97□□□□□ -1.45
RUP1Q12242 SDH4YDR178W 546 nt5.97□□□□□ -1.45
RUP1Q12242 EPS1YIL005W 2106 nt5.97□□□□□ -1.45
RUP1Q12242 YMR295CYMR295C 594 nt5.97□□□□□ -1.45
RUP1Q12242 HST2YPL015C 1074 nt5.97□□□□□ -1.45
RUP1Q12242 RVB2YPL235W 1416 nt5.97□□□□□ -1.45
RUP1Q12242 VPS70YJR126C 2436 nt5.97□□□□□ -1.45
RUP1Q12242 ILV1YER086W 1731 nt5.96□□□□□ -1.45
RUP1Q12242 WHI2YOR043W 1461 nt5.96□□□□□ -1.45
RUP1Q12242 NSE5YML023C 1671 nt5.96□□□□□ -1.46
RUP1Q12242 FYV1YDR024W 486 nt5.96□□□□□ -1.46
RUP1Q12242 AAT2YLR027C 1257 nt5.96□□□□□ -1.46
RUP1Q12242 IMD1YAR073W 1212 nt5.96□□□□□ -1.46
RUP1Q12242 RPS3YNL178W 723 nt5.96□□□□□ -1.46
RUP1Q12242 MRPL10YNL284C 969 nt5.96□□□□□ -1.46
RUP1Q12242 FSF1YOR271C 984 nt5.96□□□□□ -1.46
RUP1Q12242 SLX5YDL013W 1860 nt5.95□□□□□ -1.46
RUP1Q12242 SCO2YBR024W 906 nt5.95□□□□□ -1.46
RUP1Q12242 RAD3YER171W 2337 nt5.94□□□□□ -1.46
RUP1Q12242 ATP1YBL099W 1638 nt5.94□□□□□ -1.46
RUP1Q12242 HSP104YLL026W 2727 nt5.94□□□□□ -1.46
RUP1Q12242 TBF1YPL128C 1689 nt5.94□□□□□ -1.46
RUP1Q12242 XBP1YIL101C 1944 nt5.93□□□□□ -1.46
RUP1Q12242 CRF1YDR223W 1404 nt5.93□□□□□ -1.46
RUP1Q12242 ORM1YGR038W 669 nt5.93□□□□□ -1.46
RUP1Q12242 SWP1YMR149W 861 nt5.93□□□□□ -1.46
RUP1Q12242 POR1YNL055C 852 nt5.93□□□□□ -1.46
RUP1Q12242 YBL070CYBL070C 321 nt5.93□□□□□ -1.46
RUP1Q12242 ERG1YGR175C 1491 nt5.93□□□□□ -1.46
RUP1Q12242 JIP4YDR475C 2631 nt5.93□□□□□ -1.46
RUP1Q12242 MPA43YNL249C 1629 nt5.92□□□□□ -1.46
RUP1Q12242 HVG1YER039C 750 nt5.92□□□□□ -1.46
RUP1Q12242 RNH201YNL072W 924 nt5.92□□□□□ -1.46
RUP1Q12242 TSR3YOR006C 942 nt5.92□□□□□ -1.46
RUP1Q12242 HST3YOR025W 1344 nt5.92□□□□□ -1.46
RUP1Q12242 NMT1YLR195C 1368 nt5.92□□□□□ -1.46
RUP1Q12242 TRP3YKL211C 1455 nt5.91□□□□□ -1.46
RUP1Q12242 SKN1YGR143W 2316 nt5.91□□□□□ -1.46
RUP1Q12242 ALT2YDR111C 1524 nt5.91□□□□□ -1.46
RUP1Q12242 tR(ACG)DtR(ACG)D 73 nt5.91□□□□□ -1.46
RUP1Q12242 YHL018WYHL018W 363 nt5.91□□□□□ -1.46
RUP1Q12242 tR(ACG)EtR(ACG)E 73 nt5.91□□□□□ -1.46
RUP1Q12242 tR(ACG)KtR(ACG)K 73 nt5.91□□□□□ -1.46
RUP1Q12242 tR(ACG)LtR(ACG)L 73 nt5.91□□□□□ -1.46
RUP1Q12242 tR(ACG)OtR(ACG)O 73 nt5.91□□□□□ -1.46
RUP1Q12242 HSP78YDR258C 2436 nt5.91□□□□□ -1.46
RUP1Q12242 TFC6YDR362C 2019 nt5.91□□□□□ -1.46
RUP1Q12242 GSY2YLR258W 2118 nt5.9□□□□□ -1.46
RUP1Q12242 ENP1YBR247C 1452 nt5.9□□□□□ -1.46
RUP1Q12242 NPL6YMR091C 1308 nt5.9□□□□□ -1.47
RUP1Q12242 DSF1YEL070W 1509 nt5.89□□□□□ -1.47
RUP1Q12242 YNR073CYNR073C 1509 nt5.89□□□□□ -1.47
RUP1Q12242 MKK1YOR231W 1527 nt5.89□□□□□ -1.47
RUP1Q12242 CWC21YDR482C 408 nt5.89□□□□□ -1.47
RUP1Q12242 HAP2YGL237C 798 nt5.89□□□□□ -1.47
RUP1Q12242 ECM14YHR132C 1293 nt5.89□□□□□ -1.47
RUP1Q12242 YKL223WYKL223W 333 nt5.89□□□□□ -1.47
RUP1Q12242 YHM2YMR241W 945 nt5.89□□□□□ -1.47
RUP1Q12242 PFA3YNL326C 1011 nt5.89□□□□□ -1.47
RUP1Q12242 YEH1YLL012W 1722 nt5.88□□□□□ -1.47
RUP1Q12242 YDL057WYDL057W 987 nt5.88□□□□□ -1.47
RUP1Q12242 YJU3YKL094W 942 nt5.88□□□□□ -1.47
RUP1Q12242 MAK31YCR020C-A 267 nt5.87□□□□□ -1.47
RUP1Q12242 IDP1YDL066W 1287 nt5.87□□□□□ -1.47
RUP1Q12242 LCP5YER127W 1074 nt5.87□□□□□ -1.47
RUP1Q12242 YER148W-AYER148W-A 579 nt5.87□□□□□ -1.47
RUP1Q12242 RME1YGR044C 903 nt5.87□□□□□ -1.47
RUP1Q12242 YJL211CYJL211C 444 nt5.87□□□□□ -1.47
RUP1Q12242 TSA1YML028W 591 nt5.87□□□□□ -1.47
RUP1Q12242 YNL097W-AYNL097W-A 156 nt5.87□□□□□ -1.47
RUP1Q12242 ATF1YOR377W 1578 nt5.87□□□□□ -1.47
RUP1Q12242 RIM101YHL027W 1878 nt5.87□□□□□ -1.47
RUP1Q12242 YPK2YMR104C 2034 nt5.86□□□□□ -1.47
RUP1Q12242 EEB1YPL095C 1371 nt5.86□□□□□ -1.47
RUP1Q12242 YET3YDL072C 612 nt5.86□□□□□ -1.47
RUP1Q12242 YLR157W-EYLR157W-E 165 nt5.86□□□□□ -1.47
RUP1Q12242 RRS1YOR294W 612 nt5.86□□□□□ -1.47
RUP1Q12242 GAA1YLR088W 1845 nt5.85□□□□□ -1.47
RUP1Q12242 HXT15YDL245C 1704 nt5.85□□□□□ -1.47
RUP1Q12242 HXT16YJR158W 1704 nt5.85□□□□□ -1.47
RUP1Q12242 YDR015CYDR015C 240 nt5.85□□□□□ -1.47
RUP1Q12242 YHR213W-AYHR213W-A 234 nt5.85□□□□□ -1.47
RUP1Q12242 REV7YIL139C 738 nt5.85□□□□□ -1.47
RUP1Q12242 RET1YOR207C 3450 nt5.85□□□□□ -1.47
RUP1Q12242 ERC1YHR032W 1746 nt5.85□□□□□ -1.47
RUP1Q12242 YDL218WYDL218W 954 nt5.84□□□□□ -1.47
RUP1Q12242 AI5_BETAQ0075 1065 nt5.84□□□□□ -1.47
RUP1Q12242 YDR401WYDR401W 564 nt5.84□□□□□ -1.47
RUP1Q12242 YEL068CYEL068C 333 nt5.84□□□□□ -1.47
RUP1Q12242 RPS2YGL123W 765 nt5.84□□□□□ -1.47
RUP1Q12242 YNL285WYNL285W 372 nt5.84□□□□□ -1.47
RUP1Q12242 EMW1YNL313C 2715 nt5.84□□□□□ -1.47
RUP1Q12242 TIM22YDL217C 624 nt5.83□□□□□ -1.48
Retrieved 100 of 7,029 protein–RNA pairs in 12.1 ms