Protein–RNA interactions for Protein: Q07457

BRE1, E3 ubiquitin-protein ligase BRE1, yeastyeast

Known RBP Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
BRE1Q07457 YNL247WYNL247W 2304 nt7.18□□□□□ -1.26
BRE1Q07457 YDR034W-BYDR034W-B 156 nt7.18□□□□□ -1.26
BRE1Q07457 AIM17YHL021C 1398 nt7.18□□□□□ -1.26
BRE1Q07457 UTP9YHR196W 1728 nt7.18□□□□□ -1.26
BRE1Q07457 YEL068CYEL068C 333 nt7.17□□□□□ -1.26
BRE1Q07457 BUD32YGR262C 786 nt7.17□□□□□ -1.26
BRE1Q07457 BCY1YIL033C 1251 nt7.17□□□□□ -1.26
BRE1Q07457 YHM2YMR241W 945 nt7.17□□□□□ -1.26
BRE1Q07457 RSP5YER125W 2430 nt7.17□□□□□ -1.26
BRE1Q07457 GUD1YDL238C 1470 nt7.17□□□□□ -1.26
BRE1Q07457 TPK1YJL164C 1194 nt7.16□□□□□ -1.26
BRE1Q07457 GCV3YAL044C 513 nt7.16□□□□□ -1.26
BRE1Q07457 HST3YOR025W 1344 nt7.16□□□□□ -1.26
BRE1Q07457 GPT2YKR067W 2232 nt7.16□□□□□ -1.26
BRE1Q07457 MRPL1YDR116C 858 nt7.15□□□□□ -1.26
BRE1Q07457 YIR017W-AYIR017W-A 600 nt7.15□□□□□ -1.26
BRE1Q07457 DAP1YPL170W 459 nt7.15□□□□□ -1.26
BRE1Q07457 YPR114WYPR114W 948 nt7.15□□□□□ -1.26
BRE1Q07457 DUG1YFR044C 1446 nt7.15□□□□□ -1.27
BRE1Q07457 LYS21YDL131W 1323 nt7.14□□□□□ -1.27
BRE1Q07457 SET5YHR207C 1581 nt7.14□□□□□ -1.27
BRE1Q07457 SKS1YPL026C 1509 nt7.14□□□□□ -1.27
BRE1Q07457 YPR160C-AYPR160C-A 285 nt7.13□□□□□ -1.27
BRE1Q07457 SSK1YLR006C 2139 nt7.13□□□□□ -1.27
BRE1Q07457 BPL1YDL141W 2073 nt7.13□□□□□ -1.27
BRE1Q07457 TEP1YNL128W 1305 nt7.12□□□□□ -1.27
BRE1Q07457 GPI11YDR302W 660 nt7.12□□□□□ -1.27
BRE1Q07457 RPT3YDR394W 1287 nt7.12□□□□□ -1.27
BRE1Q07457 HAP3YBL021C 435 nt7.12□□□□□ -1.27
BRE1Q07457 GPB2YAL056W 2643 nt7.12□□□□□ -1.27
BRE1Q07457 YBR284WYBR284W 2394 nt7.11□□□□□ -1.27
BRE1Q07457 FPR2YDR519W 408 nt7.11□□□□□ -1.27
BRE1Q07457 tR(ACG)DtR(ACG)D 73 nt7.11□□□□□ -1.27
BRE1Q07457 tR(ACG)EtR(ACG)E 73 nt7.11□□□□□ -1.27
BRE1Q07457 tR(ACG)KtR(ACG)K 73 nt7.11□□□□□ -1.27
BRE1Q07457 tR(ACG)LtR(ACG)L 73 nt7.11□□□□□ -1.27
BRE1Q07457 tR(ACG)OtR(ACG)O 73 nt7.11□□□□□ -1.27
BRE1Q07457 YNL042W-BYNL042W-B 258 nt7.11□□□□□ -1.27
BRE1Q07457 CLN1YMR199W 1641 nt7.11□□□□□ -1.27
BRE1Q07457 PET112YBL080C 1626 nt7.11□□□□□ -1.27
BRE1Q07457 GEX2YKR106W 1848 nt7.11□□□□□ -1.27
BRE1Q07457 KKQ8YKL168C 2175 nt7.1□□□□□ -1.27
BRE1Q07457 EMP65YER140W 1671 nt7.1□□□□□ -1.27
BRE1Q07457 YDL129WYDL129W 876 nt7.1□□□□□ -1.27
BRE1Q07457 YKR073CYKR073C 321 nt7.1□□□□□ -1.27
BRE1Q07457 CIN4YMR138W 576 nt7.1□□□□□ -1.27
BRE1Q07457 HXK2YGL253W 1461 nt7.1□□□□□ -1.27
BRE1Q07457 DPB2YPR175W 2070 nt7.09□□□□□ -1.27
BRE1Q07457 GTT3YEL017W 1014 nt7.09□□□□□ -1.27
BRE1Q07457 MRPS12YNR036C 462 nt7.09□□□□□ -1.27
BRE1Q07457 GLN1YPR035W 1113 nt7.09□□□□□ -1.27
BRE1Q07457 TKL1YPR074C 2043 nt7.09□□□□□ -1.27
BRE1Q07457 GLN3YER040W 2193 nt7.09□□□□□ -1.27
BRE1Q07457 SKY1YMR216C 2229 nt7.08□□□□□ -1.28
BRE1Q07457 ALT2YDR111C 1524 nt7.08□□□□□ -1.28
BRE1Q07457 YHR145CYHR145C 357 nt7.08□□□□□ -1.28
BRE1Q07457 YUR1YJL139C 1287 nt7.08□□□□□ -1.28
BRE1Q07457 SLD7YOR060C 774 nt7.08□□□□□ -1.28
BRE1Q07457 ENV7YPL236C 1095 nt7.08□□□□□ -1.28
BRE1Q07457 RAD24YER173W 1980 nt7.08□□□□□ -1.28
BRE1Q07457 PYK2YOR347C 1521 nt7.07□□□□□ -1.28
BRE1Q07457 ADE12YNL220W 1302 nt7.07□□□□□ -1.28
BRE1Q07457 ATG4YNL223W 1485 nt7.07□□□□□ -1.28
BRE1Q07457 PHB1YGR132C 864 nt7.07□□□□□ -1.28
BRE1Q07457 YJU2YKL095W 837 nt7.07□□□□□ -1.28
BRE1Q07457 AVO2YMR068W 1281 nt7.07□□□□□ -1.28
BRE1Q07457 HOS1YPR068C 1413 nt7.07□□□□□ -1.28
BRE1Q07457 MKC7YDR144C 1791 nt7.07□□□□□ -1.28
BRE1Q07457 VMA2YBR127C 1554 nt7.07□□□□□ -1.28
BRE1Q07457 ECM7YLR443W 1347 nt7.06□□□□□ -1.28
BRE1Q07457 SIT4YDL047W 936 nt7.06□□□□□ -1.28
BRE1Q07457 ECM19YLR390W 339 nt7.06□□□□□ -1.28
BRE1Q07457 PGK1YCR012W 1251 nt7.05□□□□□ -1.28
BRE1Q07457 COX20YDR231C 618 nt7.05□□□□□ -1.28
BRE1Q07457 LEU5YHR002W 1074 nt7.05□□□□□ -1.28
BRE1Q07457 YML083CYML083C 1257 nt7.05□□□□□ -1.28
BRE1Q07457 PDB1YBR221C 1101 nt7.05□□□□□ -1.28
BRE1Q07457 MCM3YEL032W 2916 nt7.05□□□□□ -1.28
BRE1Q07457 YHL017WYHL017W 1599 nt7.04□□□□□ -1.28
BRE1Q07457 NOP7YGR103W 1818 nt7.04□□□□□ -1.28
BRE1Q07457 COX17YLL009C 210 nt7.04□□□□□ -1.28
BRE1Q07457 DOM34YNL001W 1161 nt7.04□□□□□ -1.28
BRE1Q07457 YOL163WYOL163W 510 nt7.04□□□□□ -1.28
BRE1Q07457 FRS2YFL022C 1512 nt7.04□□□□□ -1.28
BRE1Q07457 PXL1YKR090W 2121 nt7.04□□□□□ -1.28
BRE1Q07457 ATG23YLR431C 1362 nt7.04□□□□□ -1.28
BRE1Q07457 FOB1YDR110W 1701 nt7.04□□□□□ -1.28
BRE1Q07457 UIP4YPL186C 915 nt7.03□□□□□ -1.28
BRE1Q07457 PFK2YMR205C 2880 nt7.03□□□□□ -1.28
BRE1Q07457 GEX1YCL073C 1848 nt7.03□□□□□ -1.28
BRE1Q07457 MNS1YJR131W 1650 nt7.03□□□□□ -1.28
BRE1Q07457 AFG1YEL052W 1530 nt7.02□□□□□ -1.29
BRE1Q07457 IFA38YBR159W 1044 nt7.02□□□□□ -1.29
BRE1Q07457 NOP2YNL061W 1857 nt7.02□□□□□ -1.29
BRE1Q07457 SUB2YDL084W 1341 nt7.01□□□□□ -1.29
BRE1Q07457 TPO3YPR156C 1869 nt7.01□□□□□ -1.29
BRE1Q07457 PRI2YKL045W 1587 nt7.01□□□□□ -1.29
BRE1Q07457 YPR123CYPR123C 435 nt7.01□□□□□ -1.29
BRE1Q07457 GUP2YPL189W 1830 nt7.01□□□□□ -1.29
BRE1Q07457 HXT2YMR011W 1626 nt7.01□□□□□ -1.29
Retrieved 100 of 7,029 protein–RNA pairs in 14.1 ms