Protein–RNA interactions for Protein: Q01080

RPA49, DNA-directed RNA polymerase I subunit RPA49, yeastyeast

Predicted RBP Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPA49Q01080 YOL163WYOL163W 510 nt6.32□□□□□ -1.4
RPA49Q01080 ENP1YBR247C 1452 nt6.32□□□□□ -1.4
RPA49Q01080 PXL1YKR090W 2121 nt6.32□□□□□ -1.4
RPA49Q01080 RSC2YLR357W 2670 nt6.32□□□□□ -1.4
RPA49Q01080 PRP24YMR268C 1335 nt6.31□□□□□ -1.4
RPA49Q01080 AFG1YEL052W 1530 nt6.31□□□□□ -1.4
RPA49Q01080 YOL036WYOL036W 2286 nt6.31□□□□□ -1.4
RPA49Q01080 GPA2YER020W 1350 nt6.31□□□□□ -1.4
RPA49Q01080 SGE1YPR198W 1632 nt6.3□□□□□ -1.4
RPA49Q01080 PRS2YER099C 957 nt6.3□□□□□ -1.4
RPA49Q01080 PAP2YOL115W 1755 nt6.3□□□□□ -1.4
RPA49Q01080 CNE1YAL058W 1509 nt6.3□□□□□ -1.4
RPA49Q01080 NPL6YMR091C 1308 nt6.29□□□□□ -1.4
RPA49Q01080 DAL4YIR028W 1908 nt6.29□□□□□ -1.4
RPA49Q01080 DFM1YDR411C 1026 nt6.29□□□□□ -1.4
RPA49Q01080 YPR123CYPR123C 435 nt6.29□□□□□ -1.4
RPA49Q01080 FET4YMR319C 1659 nt6.29□□□□□ -1.4
RPA49Q01080 COR1YBL045C 1374 nt6.29□□□□□ -1.4
RPA49Q01080 MNN5YJL186W 1761 nt6.29□□□□□ -1.4
RPA49Q01080 IMA5YJL216C 1746 nt6.28□□□□□ -1.4
RPA49Q01080 SUP19tS(UGA)E 82 nt6.28□□□□□ -1.4
RPA49Q01080 SUP17tS(UGA)I 82 nt6.28□□□□□ -1.4
RPA49Q01080 SUP16tS(UGA)P 82 nt6.28□□□□□ -1.4
RPA49Q01080 CIS3YJL158C 684 nt6.28□□□□□ -1.4
RPA49Q01080 EFM3YJR129C 1020 nt6.28□□□□□ -1.4
RPA49Q01080 SEN34YAR008W 828 nt6.28□□□□□ -1.4
RPA49Q01080 ICT1YLR099C 1185 nt6.28□□□□□ -1.4
RPA49Q01080 YNR040WYNR040W 771 nt6.28□□□□□ -1.4
RPA49Q01080 UBC11YOR339C 471 nt6.28□□□□□ -1.4
RPA49Q01080 YPL102CYPL102C 303 nt6.28□□□□□ -1.4
RPA49Q01080 SUP2tY(GUA)D 75 nt6.27□□□□□ -1.41
RPA49Q01080 SUP11tY(GUA)F1 75 nt6.27□□□□□ -1.41
RPA49Q01080 SUP6tY(GUA)F2 75 nt6.27□□□□□ -1.41
RPA49Q01080 SUP7tY(GUA)J1 75 nt6.27□□□□□ -1.41
RPA49Q01080 SUP4tY(GUA)J2 75 nt6.27□□□□□ -1.41
RPA49Q01080 SUP5tY(GUA)M1 75 nt6.27□□□□□ -1.41
RPA49Q01080 SUP8tY(GUA)M2 75 nt6.27□□□□□ -1.41
RPA49Q01080 SUP3tY(GUA)O 75 nt6.27□□□□□ -1.41
RPA49Q01080 MRS1YIR021W 1092 nt6.27□□□□□ -1.41
RPA49Q01080 YOR200WYOR200W 399 nt6.27□□□□□ -1.41
RPA49Q01080 MPA43YNL249C 1629 nt6.27□□□□□ -1.41
RPA49Q01080 YFR006WYFR006W 1608 nt6.26□□□□□ -1.41
RPA49Q01080 YDL022C-AYDL022C-A 249 nt6.26□□□□□ -1.41
RPA49Q01080 RPN11YFR004W 921 nt6.26□□□□□ -1.41
RPA49Q01080 SPO7YAL009W 780 nt6.26□□□□□ -1.41
RPA49Q01080 SWP1YMR149W 861 nt6.26□□□□□ -1.41
RPA49Q01080 SHP1YBL058W 1272 nt6.26□□□□□ -1.41
RPA49Q01080 AAD15YOL165C 432 nt6.26□□□□□ -1.41
RPA49Q01080 RPN7YPR108W 1290 nt6.26□□□□□ -1.41
RPA49Q01080 AIM3YBR108W 2844 nt6.26□□□□□ -1.41
RPA49Q01080 IME2YJL106W 1938 nt6.26□□□□□ -1.41
RPA49Q01080 ISN1YOR155C 1353 nt6.26□□□□□ -1.41
RPA49Q01080 DRS1YLL008W 2259 nt6.25□□□□□ -1.41
RPA49Q01080 MKK1YOR231W 1527 nt6.25□□□□□ -1.41
RPA49Q01080 YGR139WYGR139W 339 nt6.25□□□□□ -1.41
RPA49Q01080 DJP1YIR004W 1299 nt6.25□□□□□ -1.41
RPA49Q01080 ASK1YKL052C 879 nt6.25□□□□□ -1.41
RPA49Q01080 ATG12YBR217W 561 nt6.25□□□□□ -1.41
RPA49Q01080 GUF1YLR289W 1938 nt6.25□□□□□ -1.41
RPA49Q01080 CDC11YJR076C 1248 nt6.24□□□□□ -1.41
RPA49Q01080 YJU3YKL094W 942 nt6.24□□□□□ -1.41
RPA49Q01080 AVT4YNL101W 2142 nt6.24□□□□□ -1.41
RPA49Q01080 MRK1YDL079C 1506 nt6.23□□□□□ -1.41
RPA49Q01080 APE3YBR286W 1614 nt6.22□□□□□ -1.41
RPA49Q01080 COX9YDL067C 180 nt6.22□□□□□ -1.41
RPA49Q01080 HAP2YGL237C 798 nt6.22□□□□□ -1.41
RPA49Q01080 PZF1YPR186C 1290 nt6.22□□□□□ -1.41
RPA49Q01080 YBR144CYBR144C 315 nt6.22□□□□□ -1.41
RPA49Q01080 GIT1YCR098C 1557 nt6.22□□□□□ -1.41
RPA49Q01080 RAD3YER171W 2337 nt6.21□□□□□ -1.41
RPA49Q01080 LAG2YOL025W 1983 nt6.21□□□□□ -1.42
RPA49Q01080 YIR017W-AYIR017W-A 600 nt6.21□□□□□ -1.42
RPA49Q01080 YML6YML025C 861 nt6.21□□□□□ -1.42
RPA49Q01080 IES1YFL013C 2079 nt6.21□□□□□ -1.42
RPA49Q01080 DEF1YKL054C 2217 nt6.2□□□□□ -1.42
RPA49Q01080 RPE1YJL121C 717 nt6.2□□□□□ -1.42
RPA49Q01080 YNL200CYNL200C 741 nt6.2□□□□□ -1.42
RPA49Q01080 SLD7YOR060C 774 nt6.2□□□□□ -1.42
RPA49Q01080 YDR109CYDR109C 2148 nt6.2□□□□□ -1.42
RPA49Q01080 DPB2YPR175W 2070 nt6.19□□□□□ -1.42
RPA49Q01080 PKC1YBL105C 3456 nt6.19□□□□□ -1.42
RPA49Q01080 VRP1YLR337C 2454 nt6.19□□□□□ -1.42
RPA49Q01080 EGD2YHR193C 525 nt6.19□□□□□ -1.42
RPA49Q01080 YBR056C-BYBR056C-B 159 nt6.19□□□□□ -1.42
RPA49Q01080 YDR514CYDR514C 1452 nt6.18□□□□□ -1.42
RPA49Q01080 PPM1YDR435C 987 nt6.18□□□□□ -1.42
RPA49Q01080 YER186CYER186C 921 nt6.18□□□□□ -1.42
RPA49Q01080 SNN1YNL086W 309 nt6.18□□□□□ -1.42
RPA49Q01080 PUF3YLL013C 2640 nt6.18□□□□□ -1.42
RPA49Q01080 ATG23YLR431C 1362 nt6.18□□□□□ -1.42
RPA49Q01080 YPK2YMR104C 2034 nt6.17□□□□□ -1.42
RPA49Q01080 YHR145CYHR145C 357 nt6.17□□□□□ -1.42
RPA49Q01080 LYS12YIL094C 1116 nt6.17□□□□□ -1.42
RPA49Q01080 NPA3YJR072C 1158 nt6.17□□□□□ -1.42
RPA49Q01080 XBP1YIL101C 1944 nt6.17□□□□□ -1.42
RPA49Q01080 RAP1YNL216W 2484 nt6.17□□□□□ -1.42
RPA49Q01080 AMD1YML035C 2433 nt6.16□□□□□ -1.42
RPA49Q01080 GAT1YFL021W 1533 nt6.16□□□□□ -1.42
RPA49Q01080 YDL114WYDL114W 927 nt6.16□□□□□ -1.42
RPA49Q01080 QCR6YFR033C 444 nt6.16□□□□□ -1.42
Retrieved 100 of 7,029 protein–RNA pairs in 15.7 ms