Protein–RNA interactions for Protein: P49459

UBE2A, Ubiquitin-conjugating enzyme E2 A, humanhuman

Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2AP49459 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC15.02■□□□□ -0
UBE2AP49459 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC15.02■□□□□ -0
UBE2AP49459 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
UBE2AP49459 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
UBE2AP49459 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
UBE2AP49459 DUSP8P4-201ENST00000399538 1761 ntBASIC15.02□□□□□ -0.01
UBE2AP49459 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC15.02□□□□□ -0.01
UBE2AP49459 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC15.02□□□□□ -0.01
UBE2AP49459 AL359504.2-201ENST00000605506 1601 ntBASIC15.02□□□□□ -0.01
UBE2AP49459 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
UBE2AP49459 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
UBE2AP49459 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC15.01□□□□□ -0.01
UBE2AP49459 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
UBE2AP49459 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
UBE2AP49459 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
UBE2AP49459 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
UBE2AP49459 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC15.01□□□□□ -0.01
UBE2AP49459 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
UBE2AP49459 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
UBE2AP49459 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC15□□□□□ -0.01
UBE2AP49459 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
UBE2AP49459 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
UBE2AP49459 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
UBE2AP49459 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
UBE2AP49459 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC15□□□□□ -0.01
UBE2AP49459 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC15□□□□□ -0.01
UBE2AP49459 MED25-210ENST00000612854 801 ntTSL 5 BASIC15□□□□□ -0.01
UBE2AP49459 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC15□□□□□ -0.01
UBE2AP49459 MED25-214ENST00000622402 642 ntTSL 5 BASIC15□□□□□ -0.01
UBE2AP49459 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
UBE2AP49459 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
UBE2AP49459 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
UBE2AP49459 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC14.99□□□□□ -0.01
UBE2AP49459 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC14.99□□□□□ -0.01
UBE2AP49459 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC14.99□□□□□ -0.01
UBE2AP49459 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
UBE2AP49459 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
UBE2AP49459 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
UBE2AP49459 SNAI3-AS1-204ENST00000567997 2048 ntBASIC14.99□□□□□ -0.01
UBE2AP49459 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
UBE2AP49459 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
UBE2AP49459 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC14.98□□□□□ -0.01
UBE2AP49459 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
UBE2AP49459 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
UBE2AP49459 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC14.98□□□□□ -0.01
UBE2AP49459 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
UBE2AP49459 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
UBE2AP49459 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
UBE2AP49459 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
UBE2AP49459 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC14.97□□□□□ -0.01
UBE2AP49459 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
UBE2AP49459 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC14.97□□□□□ -0.01
UBE2AP49459 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC14.97□□□□□ -0.01
UBE2AP49459 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC14.97□□□□□ -0.01
UBE2AP49459 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
UBE2AP49459 MIR639-201ENST00000384974 98 ntBASIC14.97□□□□□ -0.01
UBE2AP49459 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
UBE2AP49459 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC14.97□□□□□ -0.01
UBE2AP49459 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
UBE2AP49459 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
UBE2AP49459 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC14.97□□□□□ -0.01
UBE2AP49459 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
UBE2AP49459 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
UBE2AP49459 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
UBE2AP49459 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC14.96□□□□□ -0.01
UBE2AP49459 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
UBE2AP49459 AC010501.1-201ENST00000606270 1962 ntBASIC14.96□□□□□ -0.01
UBE2AP49459 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
UBE2AP49459 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
UBE2AP49459 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
UBE2AP49459 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
UBE2AP49459 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
UBE2AP49459 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC14.95□□□□□ -0.02
UBE2AP49459 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
UBE2AP49459 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
UBE2AP49459 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
UBE2AP49459 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
UBE2AP49459 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
UBE2AP49459 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
UBE2AP49459 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
UBE2AP49459 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC14.94□□□□□ -0.02
UBE2AP49459 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
UBE2AP49459 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
UBE2AP49459 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC14.94□□□□□ -0.02
UBE2AP49459 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC14.94□□□□□ -0.02
UBE2AP49459 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
UBE2AP49459 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
UBE2AP49459 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
UBE2AP49459 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
UBE2AP49459 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
UBE2AP49459 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
UBE2AP49459 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
UBE2AP49459 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
UBE2AP49459 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
UBE2AP49459 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
UBE2AP49459 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
UBE2AP49459 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
UBE2AP49459 ERN1-208ENST00000606895 2068 ntBASIC14.93□□□□□ -0.02
UBE2AP49459 AC020928.2-201ENST00000588717 2197 ntBASIC14.93□□□□□ -0.02
UBE2AP49459 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms